Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1543 123 2e-23 >seq1543 Length=2117744 Score = 123 bits (136), Expect = 2e-23 Identities = 94/111 (85%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 |||||||||||| ||||| || | |||||||||||| |||| | ||||| ||||| Sbjct 2039317 GTTGAACAGCACGACGCCAACCTCGCCGCGGTAGTCCTCGTCCACGACGCCGGCGCCGGT 2039376 Query 5704 GTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA 5754 ||||||||||| ||| |||||||||||||||||||| ||||| |||||||| Sbjct 2039377 GTCGATGAAGTTCTTCACCGCCAGGCCGGAGCGGGGCGCCACACGGCCGTA 2039427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430046234073296