Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1529 82.4 4e-11 >seq1529 Length=1469465 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||| ||||||||||||| ||||||| |||||||||||||| ||| Sbjct 1039962 GGATCGAACCGATGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAAGGGG 1040021 Query 11528 CC 11529 || Sbjct 1040022 CC 1040023 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||| ||||||||||||| ||||||| |||||||||||||| ||| Sbjct 1040301 GGATCGAACCGATGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAAGGGG 1040242 Query 11528 CC 11529 || Sbjct 1040241 CC 1040240 Lambda K H 0.641 0.410 0.925 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261486234772408