Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1546 116 5e-21 >seq1546 Length=2252224 Score = 116 bits (128), Expect = 5e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || ||||| ||||||||||| |||||||| | || || || |||||||| Sbjct 2099832 AACAGCATGCAGGCGAAGTCGCAGTGCAGGCCCTCGTCGCGGCTGATGAGCTCGTTGGAG 2099891 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| |||||||| ||||| ||||| || ||||| || ||||| ||| || || Sbjct 2099892 AAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCG 2099951 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 || ||||| || || || || || || ||||| Sbjct 2099952 GAGAAGAAAATGCCCTCCACGGCCGCGAAGGC 2099983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622935068103280