Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1501 116 1e-20 >seq1501 Length=566706 Score = 116 bits (128), Expect = 1e-20 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 364110 CGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATAT 364169 ||| ||| |||| |||||||||||| |||| | ||| | ||||| || | ||||| || Sbjct 384783 CGCGCAGCAGCTGTGGTTTGCCATCCTGGAGGCCCAGGTGGAGACCGGCAACCCCTACAT 384842 Query 364170 GTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCA 364229 | ||||||| || |||||||||||||||||||||||| |||| || || || || Sbjct 384843 GCTGTACAAGGACCACTGCAACCGCAAGTCCAACCAGCAGAACCTGGGCACCATCAAGTG 384902 Query 364230 GAGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||| || || |||||||| || |||||| Sbjct 384903 CTCCAACCTGTGCACGGAGATTATCGAGTACACC 384936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303327582618356