Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1539 96.9 3e-15 >seq1539 Length=2020544 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/106 (81%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 51178 GTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTGCATCTTGCCCTC- 51236 ||||| |||| || |||||||||||||||||||||||| | ||||||||||||||| | Sbjct 945460 GTCCACTCCAGGATCTTCTTGGCCCAGTACATGCGCATGAAGCCGTGCATCTTGCCCACG 945519 Query 51237 -GCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGT 51281 ||| | | || | ||||||| |||||||| ||||||||||| Sbjct 945520 TGCACC--ATCTCCAGCTGAGCCGCGTTCCACAGCTCGTCGTGAGT 945563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433319771913770