Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1505 86.0 1e-11 >seq1505 Length=619805 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023 ||||| ||||||||||||| | || ||| || || || || || ||||| || Sbjct 186446 ACGATGGGCGTGATGAACTCCAGCAGGAAGCCGGGGATGCGCAGCAGCGAGGGGAAGAAG 186505 Query 326024 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 326083 || || | |||||||||| ||| || ||||| | ||||| |||| ||| ||| Sbjct 186506 CTGTGCAGGAAGTTCATGATGAGGCCCTTGATGTGCGAGCCGTCGTGATCCTGGTCCGTC 186565 Query 326084 ATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACAC 326130 |||||||||| || ||||| || ||||| | ||||| | |||||| Sbjct 186566 ATGATCATCAGGTGGCCGTACCGCAGCGACGTCGTGTTCTCGTACAC 186612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179630851886324