Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq7 109 1e-19 >seq7 Length=1004 Score = 109 bits (120), Expect = 1e-19 Identities = 137/184 (74%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 9850 CGGTCGAGCGAACCAAGGCGCAGATCCGCGCCCGGGTCGAGCATCCGTTTCATGTCGTGA 9909 ||| |||||| |||||| |||| ||| || ||||||| |||||| ||| | Sbjct 354 CGGCCGAGCGGCTGAAGGCGAGCGTCCGGGCCAGG-TCGAGCACCCGTTTATTGTGAACA 296 Query 9910 AGAACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTCTAGCCAGGAACACGGCACAGC 9969 |||||||||||| || | ||| ||||||||||| || |||| |||| ||| |||| Sbjct 295 GGAACCTGTTTCGCCACAGGAAGACCCGCTACAAGGGACTGGCCAAGAACGAGGCGCAGC 236 Query 9970 TGTTCAGTCTGTTCGCGCTGGCGAACCTGGTGATCGCGAAAAATCAGCTGTTG-TCGACT 10028 ||||||| ||||||| | |||| || || || ||||| ||||| |||| || ||| || Sbjct 235 TGTTCAGCCTGTTCGAGTTGGCTAATCTCGTCATCGCCAAAAAGTCGCTGCTGATCG-CT 177 Query 10029 CATG 10032 |||| Sbjct 176 CATG 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119031397729608