Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1491 89.7 3e-13 >seq1491 Length=442363 Score = 89.7 bits (98), Expect = 3e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | ||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 109818 CAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTC 109759 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||| ||||| |||||||||||||| || |||||||| Sbjct 109758 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 109720 Score = 89.7 bits (98), Expect = 3e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | ||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 110201 CAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTC 110142 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||| ||||| |||||||||||||| || |||||||| Sbjct 110141 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 110103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686615704402