Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_022915.1 Length=40471 Score E Sequences producing significant alignments: (Bits) Value seq1173 111 4e-20 >seq1173 Length=8897 Score = 111 bits (122), Expect = 4e-20 Identities = 133/178 (75%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 21925 CGTCCGTGCAGGCGACCATTCCACCCCTGCCGGCAACGGCGCGGGCCAGCCTGGTGGCGA 21984 || ||| || ||| | || || || |||||||| ||| || | |||| ||||| || Sbjct 2668 CGCCCGAGCCGGCAAGGATACCGCCGCTGCCGGCGGTGGCCAGGACAAGCCAGGTGGAGA 2609 Query 21985 CCCCCTCGATGTGCTCATCGACGTGTTCCGCCGGACTGACGACGCTGCGGGACAGCTTGG 22044 |||||||||||||||| |||||||| || ||||| ||||| || ||||| | | ||| Sbjct 2608 CCCCCTCGATGTGCTCGTCGACGTGCTCGGCCGGTCTGACCGTACTTCGGGA-ATCCTGG 2550 Query 22045 C-GATTACGCCGACAAGCTCAGGGTTGCCGGCCTCCAGTGCGAGCGCGACTACGACGC 22101 | || ||||||||| ||||| || ||||| ||| |||||||| | ||||| || Sbjct 2549 CTGACTACGCCGACCGGCTCAAAGTCGCCGGGCTCTCCTGCGAGCGGAATTACGATGC 2492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129383206204668