Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1535 86.0 5e-12 >seq1535 Length=1731330 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 107657 AGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAA 107716 |||| | ||| ||| |||||| | || |||| ||||| || ||||||||||||| | Sbjct 1340589 AGGCATTCCCCCGGACCAGCAGCGTCTGATTTTCGCGGGCAAGCAGCTGGAGGACGGCCG 1340530 Query 107717 AACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCG 107776 || |||| ||||||||||| || |||||||| || ||||| ||||| || | |||| Sbjct 1340529 CACCCTGGCCGACTACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGCG 1340470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398869226077462