Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1503 87.8 2e-12 >seq1503 Length=629848 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053 ||| || ||||||| | |||||||||| ||| ||| ||||||||||| || ||||| Sbjct 154013 CACCTGCGCCACCAGGCGTGTGAGCAGCGCGTACGAGGCGATGTTGAAGGGCACGCCCAG 153954 Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113 ||||| ||| | | |||||||| | | || ||||| |||||||||||||| || Sbjct 153953 GCCCACGTCGCAACTGCGCTGGTACATCAGACAGCTCAGCTCGCCGTCGGCCACGTAGAA 153894 Query 147114 CTG 147116 ||| Sbjct 153893 CTG 153891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583476636571200