Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1493 86.0 2e-11 >seq1493 Length=480678 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 349232 TGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGA 349291 || || | ||| ||||| ||||| || || || || ||||| || ||||| || ||| | Sbjct 277374 TGCGTGGGTGTCTGGCAGAATGACCGCGTGGAGATTATTGCCAACGATCAGGGCAACCGC 277315 Query 349292 ACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAA 349351 || || || || ||||| || || || || ||||||||| ||||||||||| | || || Sbjct 277314 ACCACTCCCTCGTACGTGGCCTTCACGGACACTGAGCGTCTGATTGGTGATGCCGCCAAG 277255 Query 349352 AATCA 349356 || || Sbjct 277254 AACCA 277250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515224152681074