Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20reinhardtii_20[refseq_20GCF_5F000002595.1_202007-10- 15] 1,558 sequences; 120,404,952 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq1558 801 0.0 >seq1558 Length=203828 Score = 801 bits (888), Expect = 0.0 Identities = 1522/2220 (69%), Gaps = 53/2220 (2%) Strand=Plus/Plus Query 184988 TTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGA 185047 ||||||||||||| |||| | | || || ||||| || | ||| | |||||||| Sbjct 119616 TTTCCAAAATTTAGCCAAGGTCTAGCTCAAGACCCTACTACACGTAGAATTTGGTATGGG 119675 Query 185048 TTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTTATATCAA 185107 | || | || ||||||||||| || ||||| |||||||||||| || | || ||| Sbjct 119676 CTTGCTATGGCTCATGACTTTGAAAGCCATGATGGTATGACAGAAGAAAATCTTTACCAA 119735 Query 185108 AAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAAT 185167 || | |||||| | ||||| ||||| | | || || || ||||| | | || || Sbjct 119736 AAGATTTTTGCTTCGCACTTCGGTCAATTATCTATCATTTTCTTATGGACTTCTGGAAAC 119795 Query 185168 TTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACATGTG 185227 ||| | || ||||||||||||||||||||||||| | ||| | |||||| ||| | Sbjct 119796 TTATTCCACGTAGCATGGCAAGGTAACTTTGAACAATGGGTAACTGACCCAGTTCATATT 119855 Query 185228 ATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGCATAC 185287 || || || || || |||||||| || ||||||||| || || |||| | Sbjct 119856 CGTCCAATTGCTCACGCTATTTGGGATCCACACTTTGGTCAACCAGCTGTTGAAGCATTC 119915 Query 185288 ACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTGGTGG 185347 |||| | ||| || | |||||| |||| | || || | || || |||||| Sbjct 119916 ACACGTGGTGGTGCTTCAGGTCCTGTAAACATTTCAACATCAGGTGTTTACCAATGGTGG 119975 Query 185348 TACACAGTTGGTATGAGAACTAATATGCAAC-TGTATACTGGTGGTGCATTTATGATTCT 185406 ||||| |||||||| | || ||| ||| | ||||| | ||| | | ||||| Sbjct 119976 TACACTATTGGTATGCGTACAAAT---CAAGATTTATAC-GTAGGTTCTGT----ATTCT 120027 Query 185407 ACTAGCATTGGTATC------TTTACTTGGTGCTCAATTACATC---TGAAACCAAAGTT 185457 |||| || ||||| ||| ||| |||| | | || | ||||||| || Sbjct 120028 --TAGCTTTAGTATCAGCAATTTTCCTTTTTGCTGGTTGGCTTCACTTACAACCAAACTT 120085 Query 185458 TGCACCTAAGCTTGCTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGT 185517 ||| ||| | ||||| |||||| ||| | ||||| || || || || | Sbjct 120086 CCAACCATCTCTTTCATGGTTCAAAGATGCTGAATCTCGTTTAAACCACCACCTTTCTGG 120145 Query 185518 TCTATTTGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGC 185577 | ||||||| | |||||| | |||||| | ||||| || |||||||||| || || | Sbjct 120146 TTTATTTGGTGTTAGTTCTTTAGCATGGACAGGTCACTTAGTACACGTAGCTATTCCAGA 120205 Query 185578 ATCAAGAGGA-ATCACTGTAGATTGGACTAA----TTATGTGTTTATGAAACCTCATCCT 185632 |||| | || | ||| |||| |||| ||| |||| ||||| |||||| || Sbjct 120206 ATCACGTGGTCAACAC-GTAGGTTGGGATAACTTCTTATCTGTTTT----ACCTCACCCA 120260 Query 185633 GCAGGTTTACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGA 185692 ||||||| ||||||||||| || ||||||| | ||| || |||| ||| ||| | Sbjct 120261 CAAGGTTTAACACCATTCTTTACTGGTAACTGGGCCGCTTACGCTCAAAGTCCAGATACA 120320 Query 185693 TTAAATCAAATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTCATGGGT 185752 | || | ||| ||| | | |||||||| ||| || ||||| ||| | ||| Sbjct 120321 GCTAGCCACGTTTTCGGTACTGCTCAAGGTTCTGGTCAAGCTATTTTAACTTTCTTAGGT 120380 Query 185753 GGTTTCCATCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCA 185812 |||||||| ||||||||| | |||||||| || || || || || || ||| | || Sbjct 120381 GGTTTCCACCCACAAACACAAAGTTTATGGTTAACAGACATGGCTCACCACCACTTAGCT 120440 Query 185813 ATAGGAGTAATATTCATTATTGCAGGTCATATGTATAGAAGTGCTTGGGGTATTGGTCAC 185872 || | ||||| |||||| | || ||||| |||||| | | | | |||||||||||| Sbjct 120441 ATTGCTGTAATTTTCATTGTAGCTGGTCACATGTATCGTACTAACTTTGGTATTGGTCAC 120500 Query 185873 TCAATGAAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCAT 185932 ||| | | || | ||||| |||||||| || || || | ||||||| ||||| Sbjct 120501 CGTATGCAAGCTATTTTAGAAGCTCATACACCTCCTAGTGGTTCATTAGGTGCTGGTCAC 120560 Query 185933 AAAGGATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCA 185992 ||||| |||| ||| || || | | || |||||| | || |||||||| || | ||| Sbjct 120561 AAAGGTTTATTTGATACTGTAAACAATTCTTTACACTTCCAATTAGGTCTAGCTTTAGCA 120620 Query 185993 TCTCTAGGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCT 186052 ||| | ||| | |||| | | || |||||||| ||||||||| | ||| | |||||| Sbjct 120621 TCTGTTGGTACTATTACATCTTTAGTAGCACAACACATGTACTCATTACCACCATATGCT 120680 Query 186053 TTCATAGCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCA 186112 ||| |||| | ||| || ||||| ||||| || || || ||||| || || Sbjct 120681 TTCCAAGCAATTGACTTTACAACTCAAGCAGCTCTTTACACACACCACCAATATATCGCT 120740 Query 186113 ACTGCTCTGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGAT 186172 | | | ||| |||||||||||| || || || || || || || | |||| ||| Sbjct 120741 GGTTTTATTATGTGTGGTGCTTTTGCTCACGGTGCGATCTTCTTCATTCGTGACTACGAT 120800 Query 186173 CCTACTCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATA 186232 || | || || | || ||| | | | | ||||| | ||||||||||| |||| Sbjct 120801 CCAGAACAAAACAAAGGTAACGTTTTAGCTCGTATGCTTGATCACAAAGAAGCTCTTATT 120860 Query 186233 AGTCACTTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCAT 186292 ||||||||| ||||| || |||||||||| ||||| |||||||| | || || || Sbjct 120861 TCTCACTTAAGCTGGGTTTCTTTATTCCTTGGTTTCCACACTTTAGGTCTTTACGTACAC 120920 Query 186293 AATGATGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTT 186352 || || ||| | ||||||||| || || | || || | ||||| ||| ||||| Sbjct 120921 AACGACGTAATGCAAGCATTTGGTACACCAGAAAAGCAAATCCTTATTGAGCCTGTATTT 120980 Query 186353 GCACAGTGGATACAGGCAGCATCA-GGTAAGATGATGTATGGATTAAGTTTCTTACTATC 186411 || || ||||| || || || ||| ||||| | || || || ||||||| |||| Sbjct 120981 GCTCAATGGATCCAAGCTGC-TCACGGTAAAGCTTTATACGGTTTCGATTTCTTATTATC 121039 Query 186412 TGATCCAAATAGTGCTGCAAGT-CTAGCAG-CAGAGAGTATG----CCTGGTAATCATTA 186465 | | || |||||| || | ||| | || || |||| |||||| Sbjct 121040 TTCTAAAACTAGTGCAGCTTTTGCTAATGGTCAAAGCTTATGGTTACCTGGT-------- 121091 Query 186466 CTGGATGAGTGCTATGAATGATCAAACAAACAGTCTGT-TTC-TACCAATAGGACCTGCT 186523 ||| | |||||| || | ||| |||| | ||| | ||| || | || || |||| | Sbjct 121092 -TGGTTAGATGCTATTAA-CAACAACCAAA-ACTCTTTATTCTTAACTATTGGCCCTGGT 121148 Query 186524 GATTTATTAGTTCATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTC 186583 || || | ||||| || |||||||| | || | || |||||||| |||||||| || Sbjct 121149 GACTTCCTTGTTCACCACGCTATTGCTTTAGGTCTTCACACTACAACATTAATCCTTGTT 121208 Query 186584 AAGGGTGCATTAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATAT 186643 || ||||| | |||||| | ||||| ||||| || |||||||| ||||| || || || Sbjct 121209 AAAGGTGCTCTTGATGCTCGTGGTTCTAAACTAATGCCAGATAAAAAAGACTTTGGTTAC 121268 Query 186644 TCATTCCCTTGTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCT 186703 ||||| ||||| ||||| || | || ||||||||||| | ||| | || |||||| Sbjct 121269 AGCTTCCCATGTGACGGTCCTGGTCGTGGCGGTACTTGTGACATTTCAGCTTACGATGCT 121328 Query 186704 TTCTATCTCTCTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCAC 186763 ||||| | |||| |||||| | || || || | |||| | || || |||||| Sbjct 121329 TTCTACTTAGCTGTATTCTGGATGCTTAACACTATTGGTTGGGTAACATTCTACTGGCAC 121388 Query 186764 TGGAAGAACCTTGCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATAT 186823 ||||| | | || ||||||||||| ||||||||| || ||| || || Sbjct 121389 TGGAAACATTTAACTTTATGGCAAGGTAACGTAGCACAATTCGATGAATCGTCTACTTAC 121448 Query 186824 CTTATGGGTTGGTTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTAC 186883 | ||||||||||| | || || || ||| || | | | |||| | || ||| Sbjct 121449 TTAATGGGTTGGTTACGTGACTACCTATGGTTAAACTCTTCTCAATTAATTAATGGTTAC 121508 Query 186884 ACACCATTTGGTATGAA-TAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTT 186942 | |||||||||||||| | || | ||||| ||||| |||| ||||| |||||||| || Sbjct 121509 AACCCATTTGGTATGAACTCAT-TATCTGTTTGGGCTTGGACTTTCTTATTTGGTCACTT 121567 Query 186943 AGTTTGGGCAACAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAAT 187002 | ||| || || || || |||||| | ||||||||| | ||||| |||||||||||||| Sbjct 121568 AATTTACGCTACTGGTTTCATGTTCTTAATTTCTTGGCGTGGTTACTGGCAAGAGTTAAT 121627 Query 187003 TGAGACTCTTGCTTGGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGGAGAGA 187062 ||| ||||||| |||||| || ||| ||| || |||| || ||| | |||| ||| Sbjct 121628 TGAAACTCTTGTTTGGGCTCACGAAAAAACACCTCTAGCTAACTTAGTATACTGGAAAGA 121687 Query 187063 TAAACCAGTGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACATTTTGCCAT 187122 |||||||| || ||||||||||| ||||| | |||| |||||| | || || | | Sbjct 121688 CAAACCAGTTGCTCTTTCTATTGTACAAGCTCGTTTAGTAGGTTTAGCTCACTTCTCAGT 121747 Query 187123 AGGATTTGTGCTTACCTATGCACCATTCCTGATAGCAACAACAGCAAGTAGATACGGTTA 187182 ||| | | | |||| || ||| ||||| | || || | || || || | | |||||| Sbjct 121748 AGGTTATATCTTTACTTACGCAGCATTCTTAATTGCTTCGACTTCAGGTCGTTTCGGTTA 121807 Score = 500 bits (554), Expect = 1e-136 Identities = 1321/2013 (66%), Gaps = 129/2013 (6%) Strand=Plus/Minus Query 183007 CTTTCAAGGTGCTAGGTTTTCAAACTATACAGGATGGTTGGCAGACCCAACTCATGTAAA 183066 ||| || ||||| | |||||||||||| || ||||| ||||| ||||| | || Sbjct 71500 CTTCCATGGTGCACGTTTTTCAAACTATGAAGCTTGGTTAAGTGACCCTACTCACATTAA 71441 Query 183067 ACCTGGTGCTCAAGTGGTTTGGCCTATACTTGGTCAAGAGATATTGAATGGAGATCAGGG 183126 ||| |||||||||| || |||||||| | |||||||| || || || || ||| || Sbjct 71440 ACCAAGTGCTCAAGTAGTATGGCCTATTGTAGGTCAAGAAATTTTAAACGGTGATGTAGG 71381 Query 183127 TGCAGGATATCAAGGTATTAGAATTACATCTGGTTTATTTCAGATGTGGAGAGCATGGGG 183186 || || | ||||||||| |||||| |||||||| || || | ||| | || | || Sbjct 71380 TGGTGGTTTCCAAGGTATTCAAATTACTTCTGGTTTCTTCCAATTATGGCGTGCTAGTGG 71321 Query 183187 TATAACAAATGAAACTCAACTAATGGCGCTAGCACTAGGTGCTTTAGTTATGGCAGCAGT 183246 ||| || | |||| ||||| | |||| | |||| |||||| ||||| || | Sbjct 71320 TATTACTAGTGAATTACAACTTTATACTACAGCAATTGGTGGTTTAGTAATGGCTGCTGC 71261 Query 183247 TATGTTTAATGCTGGTGCATTTCATTTTCACGTTGCTGCTCCTAAGTTATCATGGTTTCA 183306 ||||| ||||||| || || | ||| |||||||| || || |||||| || Sbjct 71260 AATGTTCTTTGCTGGTTGGTTCCACTACCACAAAGCTGCTCCAAAACTAGAATGGTTCCA 71201 Query 183307 GAATGTAGAATCTATGATGAATCATCACCTTGCAGGTTTGCTTGGTCTTGGTTCTTTAGG 183366 || || ||||| ||| | || || ||| | | ||| | |||||| | ||| ||||| Sbjct 71200 AAACGTTGAATCAATGTTAAACCACCACTTAGGTGGTCTTCTTGGTTTAGGTAGTTTAGC 71141 Query 183367 ATGGGCAGGACATTTAATTCATATTTCAATCCCAACTAATATGTTGATGGATGCCATAGA 183426 ||||| || || |||||| |||| | ||| || | || || |||| Sbjct 71140 TTGGGCTGGTCACCAAATTCACGTTTCTTTACCAGTAAACAAATT-----AT----TAGA 71090 Query 183427 TGCTGGCACACCAATGGTATTAAATGGTAGATTGATAGAGACACTAACTGATATACCACC 183486 |||||| |||||| | || || || |||| Sbjct 71089 TGCTGGT-------------------GTAGAT-----------CCAAAAGAAATTCCACT 71060 Query 183487 ACCTCATGTTCTCTG------TAGTCCTAGTGTTGCAGGTCAAATATTACCTGGTTTAAG 183540 ||||||| | | | | || ||| | | || | | ||| || |||| Sbjct 71059 TCCTCATGATTTATTATTAAATCGTGCTATTATGGCTG---ACTTATACCCAAGTTTTGC 71003 Query 183541 TAGTGGAGTATCTAACTTCTTCTCACTCAACTGGATGGCATTTACAGATTTCCTCACCTT 183600 || || | || ||||| | | ||||||| | || | |||||| | || || Sbjct 71002 TAAAGGTATTGCTCCTTTCTTTACTTTAAACTGGAGTGAATACAGTGATTTCTTAACATT 70943 Query 183601 TAAAGGTGGTTTGAATCCTGTAACTGGCAGTCTTTGGATGACAGATATAGCACATCATCA 183660 |||||||||||| || ||||| ||||| |||||||| | | |||| || || || || Sbjct 70942 TAAAGGTGGTTTAAACCCTGTTACTGGTGGTCTTTGGTTAAGTGATACTGCTCACCACCA 70883 Query 183661 CCTAGCAATAGCAGTTATGTTTATCATTGCAGGTCATATGTATCGCACAAACTGGGGTAT 183720 | |||| || || || | || | | || ||||| |||||||| || ||||||||||| Sbjct 70882 CGTAGCTATTGCTGTATTATTCTTAGTAGCTGGTCACATGTATCGTACTAACTGGGGTAT 70823 Query 183721 TGGTCAATCAATGAAAGAGATATTAGATGGTCAGAATGGTTTCCC---ACAGGGTGTCAC 183777 |||||| |||||||| || ||||| | ||| |||| || ||||| || Sbjct 70822 TGGTCACAGTATGAAAGAAATTTTAGAAGCTCACCGTGGT--CCATTTACAGG-TGAAGG 70766 Query 183778 ACACAGAGGATTATATGAATTTCTAGCAGAATCAAGACATGCACAACTATCACTGAATCT 183837 ||| || ||||||||| || || || || | ||||||||| || | | || | Sbjct 70765 TCACGTTGGTTTATATGAAATTTTAACAACTTCTTGGCATGCACAATTAGCTATTAACTT 70706 Query 183838 GGCAATGCTAGGATC--TATCAGTATCATAGTTTCACATCATATGTATGCAATGCCACCT 183895 || | | || || ||||| || || || | || || ||||| |||||||| || Sbjct 70705 AGCTTTATTTGGTTCGTTATCA--ATTATTGTAGCTCACCACATGTACGCAATGCCTCCA 70648 Query 183896 TATCCATATCTTGGTATTGAATATCCAACAGTAGTAGGATTATTCACCCATCATATGTGG 183955 || || ||| | | || ||| || ||| | || |||||| || || || | ||| Sbjct 70647 TACCCTTATTTAGCTACTGATTACGGTACACAATTATCATTATTTACACACCACACATGG 70588 Query 183956 ATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCTTCAATTGCTATGATAAGAGAC 184015 || |||||||| |||||| ||||| || || || | ||| ||| | | ||| Sbjct 70587 ATTGGTGGTTTCTGTATTGTTGGTGCTGGTGCTCACGCAGCTATTTTCATGGTTCGTGAC 70528 Query 184016 TATAATCCTGTTCAACA-TATGGGAAATGTATTAGATAGAATACTTAAATCTAGAGATGC 184074 || ||||| | | | || || | ||||||| | || || | ||||| Sbjct 70527 TACGATCCTACTAATAACTACAACAACT-TATTAGACCGTGTAATTCGTCACCGTGATGC 70469 Query 184075 AATCATCAGTCACTTGAACTGGGTATGCATCTTTTTAGGTTTTCATAGTTTTGGTCTTTA 184134 || || |||||| |||||||| || || || |||||||| || || |||||| | || Sbjct 70468 TATTATTTCTCACTTAAACTGGGTTTGTATTTTCTTAGGTTTCCACAGCTTTGGTTTATA 70409 Query 184135 TATTCACAATGATATTATGAGAGCATTGGGTAGACCTAATGATCTATTCAGTGATACAGC 184194 || ||||| |||| ||||| || || ||| | ||| | || | ||| ||||| || Sbjct 70408 CATCCACAACGATACAATGAGTGCTTTAGGTCGTCCTCAAGACATGTTCTCAGATACTGC 70349 Query 184195 AATACAATTACAACCTGTATTTGCACAGTCTGTTCAGAGATTACATGCTTCAT---TATA 184251 || ||| | ||||| |||||||| || | |||| | |||| |||| | | | Sbjct 70348 TATCCAACTTCAACCAGTATTTGCTCAATGGATTCAAAA--TACACACTTCTTAGCTCCA 70291 Query 184252 TAAT-----GTCTCTGATGTATTTGGTGGATCAACCACAA-------TGGT--------- 184290 ||| | | ||| || | || ||| || |||| Sbjct 70290 CAATTAACAGCACCAAATGCTTTAGCTGCTACAAGTTTAACTTGGGGTGGTGAGCTAGGT 70231 Query 184291 -----TGGTGGTAAGATTGCTAATGCT-CCTTTTGTACTAGGTACAGCAGACTTTATGAT 184344 ||| ||||| | |||| || | ||| || ||||||| | ||||||||| | Sbjct 70230 GCTCATGGCGGTAAAGTAGCTA-TGATGCCTATTTCTTTAGGTACTTCTGACTTTATGGT 70172 Query 184345 ACATCACATACACGCTTTCCAGATTCATGTTTGTGTATTAATTCTTCTCAAGGGTGTTTT 184404 || ||||| ||||||||| ||||| || ||| ||||||||||| || |||||||| Sbjct 70171 TCACCACATTCACGCTTTCACAATTCACGTAACTGTGTTAATTCTTCTGAAAGGTGTTTT 70112 Query 184405 ATACTCTAGAAACTCACAATTAATACCAGATAAGAGTAAGTTAGGATTCAGATTCCCTTG 184464 || || | | ||| | | || |||||||| ||| ||||| ||| | |||||||| Sbjct 70111 ATTTGCTCGTAGCTCTCGTCTTATCCCAGATAAAGCTAACTTAGGTTTCCGTTTCCCTTG 70052 Query 184465 TGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAGGATGGGATCATGTATTCCTTGG 184524 ||| ||||||||| | || || ||||||||||| || | ||||| || |||||| | || Sbjct 70051 TGACGGTCCTGGTCGTGGCGGTACTTGTCAGGTTTCTGCTTGGGACCACGTATTCTTAGG 69992 Query 184525 TTTATTCTGGATGTATAATTGCATCTCTATAGTAATCTTCCACTTTAGTTGGAGAATGCA 184584 | | ||||||||||| || || | || || ||||| |||||||| || |||| ||||| Sbjct 69991 TCTTTTCTGGATGTACAACAGCTTATCAATTGTAATTTTCCACTTCAGCTGGAAGATGCA 69932 Query 184585 A---GATGTATGGGGT----------CT---------------AT--CAGGAGGTAACTT 184614 | ||||| |||||| || || | || |||||||| Sbjct 69931 ATCTGATGTTTGGGGTACGGTTACAGCTTCTGGTGTTTCTCACATTACTGGTGGTAACTT 69872 Query 184615 TGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACTTCTTATGGTCACAGTCAAG 184674 ||| || || | | |||||||| || ||||| | |||||||||||| |||| ||| Sbjct 69871 TGCACAAAGCGCTAACACAATCAACGGTTGGTTACGTGACTTCTTATGGGCACAATCATC 69812 Query 184675 TCAAGTTCTCAATAGTTATGGACAAG--ACATCAGCATGTATGGTTTGCTATTTCTT-GG 184731 ||||| || | || || || ||| || |||||||| | |||||| || Sbjct 69811 ACAAGTAATCCAATCATACGGTTCAGCTCTATCTGC--TTATGGTTTAAT-TTTCTTAGG 69755 Query 184732 AGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGAGTGGTAGAGGATACTGGCA 184791 || || || |||||||||||| || |||||| ||| |||| | || |||||||| Sbjct 69754 TGCTCACTTCGTATGGGCATTCTCGTTAATGTTCTTATTCTCTGGTCGTGGTTACTGGCA 69695 Query 184792 AGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTAAAACTTGCACCTACCATTCA 184851 ||| | || || || |||| ||||| || |||||| | ||| |||||||| | ||||| Sbjct 69694 AGAACTTATCGAATCAATTGTATGGGCTCACAACAAACTTAAAGTTGCACCTGCAATTCA 69635 Query 184852 ACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGAGTTGCACACTTCTTACTTGG 184911 |||| | || | ||||| ||||| ||||||||||| || || |||| | | | || Sbjct 69634 ACCACGTGCTTTAAGTATTACTCAAGGTCGTGCTGTTGGTGTAGCTCACTACCTTTTAGG 69575 Query 184912 AGGTATTGCCACAACATGGGCATTCTTCTTTGC 184944 |||||||| || |||||| | |||||||| || Sbjct 69574 TGGTATTGCTACTACATGGTCGTTCTTCTTAGC 69542 Score = 497 bits (550), Expect = 1e-135 Identities = 725/1026 (71%), Gaps = 29/1026 (3%) Strand=Plus/Minus Query 190793 TGGTTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCT 190852 ||||| |||| |||||||||| | | || | || |||||| |||||||||| Sbjct 175593 TGGTTCGATGACGCTGATGACTGGCTTCGTCAAGACCGTTTCGTATTCGTAGGTTGGTCA 175534 Query 190853 GGTCTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACA 190912 ||| | || |||| || ||||||| | | || | ||||||||||| || || ||||| Sbjct 175533 GGTTTATTACTATTCCCTTGTGCTTACTTTGCATTAGGTGGTTGGTTAACTGGTACTACT 175474 Query 190913 TTTGTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTT 190972 || |||||| |||||||| ||||| | || |||| ||| | ||||| ||||| Sbjct 175473 TTCGTTACTTCATGGTATACGCATGGTTTAGCTACTTCTTACTTAGAAGGTTGTAACTTC 175414 Query 190973 TTGACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGG 191032 || |||||||| || || ||||||| | | ||||| ||| | | |||| | ||| Sbjct 175413 TTAACAGCAGCTGTTTCTACACCTGCTAACAGTATGGCTCACTCTCTTCTATTTGTTTGG 175354 Query 191033 GGTCCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACTTT 191092 |||||||| || |||||| || |||||||| ||| ||||||| | ||| || Sbjct 175353 GGTCCAGAAGCTCAAGGTGATTTCACTCGTTGGTGTCAACTTGGTGGTTTATGGGCATTC 175294 Query 191093 GTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCA 191152 || || | || |||| ||||||| | || || |||||| | ||||||||||||||||| Sbjct 175293 GTTGCTTTACACGGTGCATTTGGTTTAATTGGTTTCATGCTTCGTCAGTTTGAAATTGC- 175235 Query 191153 GGATTGGTGGGTA---TTA-GACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGT 191208 | | | ||| ||| | || ||||| || ||||||| || || || || || Sbjct 175234 ---TCGTTCAGTAAACTTACGTCCATACAACGCAATTGCTTTCTCAGCACCAATTGCTGT 175178 Query 191209 TTTCACAAGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTC 191268 ||| |||||| |||| || ||| | ||||| ||||||||||||||||| Sbjct 175177 ATTCGTTTCAGTATTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCACCTAG 175118 Query 191269 ATTTGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTAC 191328 || || || || || ||||| | | ||| ||||| | |||||||||||||| || Sbjct 175117 TTTCGGTGTAGCTGCTATCTTCCGTTTCATTTTATTCTTCCAAGGTTTCCACAACTGGAC 175058 Query 191329 ACTCAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGC 191388 ||| ||||| |||||||||||||| ||||| ||| || |||||| || ||| ||||||| Sbjct 175057 ACTTAACCCATTCCACATGATGGGTGTTGCTGGTGTTTTAGGTGCTGCTTTATTATGTGC 174998 Query 191389 CATTCATGGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGG 191448 ||||| |||||||| || | ||||| || | || ||| || Sbjct 174997 TATTCACGGTGCTACTGTTGAAAACACATTATTCGA------------------AGACGG 174956 Query 191449 TCAAGTTCAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTC 191508 | | | | || || || | ||||| | || ||||||| ||| ||||| || || Sbjct 174955 TGACGGT---GCTAACACATTCCGTGCATTCAACCCTACACAGGCTGAAGAAACATACTC 174899 Query 191509 TATGATCACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAG 191568 |||| | ||||| ||| | ||||||||||| || || ||| |||| |||||||||||| | Sbjct 174898 TATGGTTACTGCTAACCGTTTCTGGTCACAAATCTTCGGTGTTGCTTTCTCTAACAAACG 174839 Query 191569 ATTTCTACACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGG 191628 | || |||||||| ||||| || ||||| |||| || | |||| | || || Sbjct 174838 TTGGCTTCACTTCTTCATGTTATTAGTTCCAGTAACTGGTCTTTGGATGAGTGCTATTGG 174779 Query 191629 TATTGTAGGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGC 191688 | |||||||| | || || |||||| | || || || || ||||| |||||||| | || Sbjct 174778 TGTTGTAGGTTTAGCTCTAAACTTACGTGCTTACGACTTCGTATCACAAGAGATTCGTGC 174719 Query 191689 AGCAGAAGACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTAT 191748 || |||||||| || || ||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 174718 TGCTGAAGACCCTGAATTCGAAACATTCTACACTAAAAACATTCTTCTTAACGAAGGTAT 174659 Query 191749 GAGAGCATGGATGTCTTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGT 191808 | || |||||| || | ||||||||| || || || || ||||| || ||||| Sbjct 174658 TCGTGCTTGGATGGCTGCTCAAGACCAACCACACGAACGTTTAGTATTCCCTGAAGAAGT 174599 Query 191809 TCTACC 191814 |||| Sbjct 174598 ATTACC 174593 Score = 210 bits (232), Expect = 3e-49 Identities = 185/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 190142 ATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACATAATATCCTTATGCAC 190201 ||||| ||||| |||||||||||| | ||||||||||||||||| || |||||||||||| Sbjct 51128 ATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCAGAACACAACATCCTTATGCAC 51069 Query 190202 CCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTATTCTCTGCAATGCAT 190261 |||||||| ||| |||||| || ||| | || ||||| |||||||||| || ||||| Sbjct 51068 CCATTCCACATGTTAGGTGTTGCTGGTGTATTCGGTGGTTCATTATTCTCAGCTATGCAC 51009 Query 190262 GGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTAGAGTCACAGAACTAT 190321 ||||| | || || || ||| ||||| | |||||||||| || ||| ||| | Sbjct 51008 GGTTCTTTAGTTACTTCATCTTTAATCCGTGAAACAACTGAAAACGAATCAGCTAACGAA 50949 Query 190322 GGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCTGCTCAT 190372 |||||| || || |||||||||||||| |||||||| |||||||||||| Sbjct 50948 GGTTACCGTTTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCAT 50898 Score = 210 bits (232), Expect = 3e-49 Identities = 185/231 (80%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 190142 ATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACATAATATCCTTATGCAC 190201 ||||| ||||| |||||||||||| | ||||||||||||||||| || |||||||||||| Sbjct 143075 ATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCAGAACACAACATCCTTATGCAC 143134 Query 190202 CCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTATTCTCTGCAATGCAT 190261 |||||||| ||| |||||| || ||| | || ||||| |||||||||| || ||||| Sbjct 143135 CCATTCCACATGTTAGGTGTTGCTGGTGTATTCGGTGGTTCATTATTCTCAGCTATGCAC 143194 Query 190262 GGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTAGAGTCACAGAACTAT 190321 ||||| | || || || ||| ||||| | |||||||||| || ||| ||| | Sbjct 143195 GGTTCTTTAGTTACTTCATCTTTAATCCGTGAAACAACTGAAAACGAATCAGCTAACGAA 143254 Query 190322 GGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCTGCTCAT 190372 |||||| || || |||||||||||||| |||||||| |||||||||||| Sbjct 143255 GGTTACCGTTTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCAT 143305 Score = 210 bits (232), Expect = 3e-49 Identities = 194/246 (79%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 182486 ATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCT 182545 ||| |||| ||||||||| || |||||||| ||||| || || |||||||| ||| Sbjct 189462 ATGGCTCATATCGTTAAAATTTACGATACTTGTATTGGTTGTACTCAATGTGTACGTGCT 189521 Query 182546 TGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTGCT 182605 |||||||| ||||| |||||||||||||| |||||||| || ||||| | ||||| || Sbjct 189522 TGTCCATTAGATGTTTTAGAAATGGTTCCATGGGATGGTTGTAAAGCTAGTCAAATGGCG 189581 Query 182606 TCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACA 182665 || | || | ||||| || |||||||| || || | ||||||||||| |||||||| Sbjct 189582 TCAGCTCCACGCACTGAAGACTGTGTAGGTTGCAAACGTTGTGAAACAGCTTGTCCTACT 189641 Query 182666 GACTTTTTAAGTATTCGTGTTTACTTGGGTGCAGAAACCACAAGAAGCATGGGTCTAGCA 182725 ||||| |||||| |||||||||| | ||| |||||| ||||||||| ||||| || | Sbjct 189642 GACTTCTTAAGTGTTCGTGTTTATCTAGGTTCAGAAAGCACAAGAAGTATGGGCTTATCT 189701 Query 182726 TATTAA 182731 || ||| Sbjct 189702 TACTAA 189707 Score = 185 bits (204), Expect = 1e-41 Identities = 211/282 (75%), Gaps = 6/282 (2%) Strand=Plus/Minus Query 190371 ATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTTTAC 190430 |||||||||||||| | || |||||||| || ||||| ||||||||||| | |||| Sbjct 49079 ATGGTTACTTTGGTCGTCTAATCTTCCAATACGCTTCTTTCAACAACTCTCGTTCATTAC 49020 Query 190431 ACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATTTGCA 190490 ||||||||||||| | | || |||| | || | ||||| || | | ||| | | | Sbjct 49019 ACTTCTTCTTAGCTGCTTGGCCGGTAATCGGTATTTGGTTCACTGCTTTAGGTTTATCAA 48960 Query 190491 CAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGTA 190550 | ||||||||||||||||| ||||||||||| ||||| || ||||| || |||||||| Sbjct 48959 CTATGGCATTCAACTTAAACGGTTTCAACTTCAACCAATCAGTAGTAGACTCACAAGGT- 48901 Query 190551 AAATTGTTCCA---ACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAA 190607 ||| | | || |||| || | | ||| | || ||| | ||||||||||||| Sbjct 48900 --CGTGTACTAAACACTTGGGCAGACATCATCAACCGTGCTAACTTAGGTATGGAAGTAA 48843 Query 190608 TGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTT 190649 |||| || | || || ||||||||||| |||||| |||||| Sbjct 48842 TGCACGAGCGTAACGCTCACAACTTCCCTCTAGACTTAGCTT 48801 Score = 185 bits (204), Expect = 1e-41 Identities = 211/282 (75%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 190371 ATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTTTAC 190430 |||||||||||||| | || |||||||| || ||||| ||||||||||| | |||| Sbjct 145124 ATGGTTACTTTGGTCGTCTAATCTTCCAATACGCTTCTTTCAACAACTCTCGTTCATTAC 145183 Query 190431 ACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATTTGCA 190490 ||||||||||||| | | || |||| | || | ||||| || | | ||| | | | Sbjct 145184 ACTTCTTCTTAGCTGCTTGGCCGGTAATCGGTATTTGGTTCACTGCTTTAGGTTTATCAA 145243 Query 190491 CAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGTA 190550 | ||||||||||||||||| ||||||||||| ||||| || ||||| || |||||||| Sbjct 145244 CTATGGCATTCAACTTAAACGGTTTCAACTTCAACCAATCAGTAGTAGACTCACAAGGT- 145302 Query 190551 AAATTGTTCCA---ACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAA 190607 ||| | | || |||| || | | ||| | || ||| | ||||||||||||| Sbjct 145303 --CGTGTACTAAACACTTGGGCAGACATCATCAACCGTGCTAACTTAGGTATGGAAGTAA 145360 Query 190608 TGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTT 190649 |||| || | || || ||||||||||| |||||| |||||| Sbjct 145361 TGCACGAGCGTAACGCTCACAACTTCCCTCTAGACTTAGCTT 145402 Score = 149 bits (164), Expect = 8e-31 Identities = 157/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 189797 GATGGCATCAGAGAGCCAGTTGCAGGTTCACTTCTCTATGGTAACAACATCATTTCTGGT 189856 ||||| ||| | || |||||| ||||||| ||||| || ||||||||||||||| | ||| Sbjct 53984 GATGGTATCCGTGAACCAGTTTCAGGTTCTCTTCTTTACGGTAACAACATCATTACAGGT 53925 Query 189857 GCTGTTGTACCTTCATCAAATGCTATTGGTCTACACTTCTACCCAATCTGGGAAGCAGCA 189916 ||||| | || | || || || || ||||| |||||||||||||| |||||||| || Sbjct 53924 GCTGTAATCCCAACTTCTAACGCAATCGGTCTTCACTTCTACCCAATTTGGGAAGCTGCT 53865 Query 189917 ACAGTAGATGAGTGGCTTTACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTT 189976 | |||| |||||| | ||||| |||||||||||||| | | | | ||||||||| Sbjct 53864 TCTCTAGACGAGTGGTTATACAACGGTGGTCCTTACCAACTTATCGTTTGTCACTTCCTT 53805 Query 189977 ATTGGTATCT-CAGCATACATGGG 189999 | ||| | | | || |||||||| Sbjct 53804 CTAGGTGTATACTGC-TACATGGG 53782 Score = 149 bits (164), Expect = 8e-31 Identities = 157/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 189797 GATGGCATCAGAGAGCCAGTTGCAGGTTCACTTCTCTATGGTAACAACATCATTTCTGGT 189856 ||||| ||| | || |||||| ||||||| ||||| || ||||||||||||||| | ||| Sbjct 140219 GATGGTATCCGTGAACCAGTTTCAGGTTCTCTTCTTTACGGTAACAACATCATTACAGGT 140278 Query 189857 GCTGTTGTACCTTCATCAAATGCTATTGGTCTACACTTCTACCCAATCTGGGAAGCAGCA 189916 ||||| | || | || || || || ||||| |||||||||||||| |||||||| || Sbjct 140279 GCTGTAATCCCAACTTCTAACGCAATCGGTCTTCACTTCTACCCAATTTGGGAAGCTGCT 140338 Query 189917 ACAGTAGATGAGTGGCTTTACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTT 189976 | |||| |||||| | ||||| |||||||||||||| | | | | ||||||||| Sbjct 140339 TCTCTAGACGAGTGGTTATACAACGGTGGTCCTTACCAACTTATCGTTTGTCACTTCCTT 140398 Query 189977 ATTGGTATCT-CAGCATACATGGG 189999 | ||| | | | || |||||||| Sbjct 140399 CTAGGTGTATACTGC-TACATGGG 140421 Score = 125 bits (138), Expect = 9e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 190005 AGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCAC 190064 ||||||||||||| | | | |||||||| | || |||||| ||| ||||| ||||| | Sbjct 52364 AGTGGGAATTATCTTTCCGTTTAGGTATGCGTCCATGGATCGCTGTAGCTTACTCAGCTC 52305 Query 190065 CAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTG 190124 ||||| ||||||| | || |||||| | || ||||| | || || ||||||||||||| Sbjct 52304 CAGTAGCTGCAGCTTCAGCTGTATTCTTAGTTTACCCTATCGGCCAAGGTTCATTCTCTG 52245 Query 190125 ATGGTATGCCTTTAGGT 190141 | ||||||||||||||| Sbjct 52244 ACGGTATGCCTTTAGGT 52228 Score = 125 bits (138), Expect = 9e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 190005 AGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCAC 190064 ||||||||||||| | | | |||||||| | || |||||| ||| ||||| ||||| | Sbjct 141839 AGTGGGAATTATCTTTCCGTTTAGGTATGCGTCCATGGATCGCTGTAGCTTACTCAGCTC 141898 Query 190065 CAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTG 190124 ||||| ||||||| | || |||||| | || ||||| | || || ||||||||||||| Sbjct 141899 CAGTAGCTGCAGCTTCAGCTGTATTCTTAGTTTACCCTATCGGCCAAGGTTCATTCTCTG 141958 Query 190125 ATGGTATGCCTTTAGGT 190141 | ||||||||||||||| Sbjct 141959 ACGGTATGCCTTTAGGT 141975 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 182850 CAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGATTTTG 182909 ||||||| || || ||||| || ||||| ||||| | ||||||||||||||||| |||| Sbjct 174355 CAAAAGGTCCAAACACAACAACTTGGATTTGGAACCTTCACGCAGATGCTCATGACTTTG 174296 Query 182910 ATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTTGCTC 182969 | | ||| | |||||||| |||| | ||| |||||| |||| ||||||||||| || Sbjct 174295 ACAGTCATACAAGTGATCTAGAAGAAATTTCTAGAAAAGTATTCAGTGCACACTTTGGTC 174236 Query 182970 ATCTAGGTATCATCTT 182985 | |||||||||| || Sbjct 174235 AATTAGGTATCATTTT 174220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631414902955280