Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq556 86.0 8e-12 seq108 82.4 9e-11 >seq556 Length=54819 Score = 86.0 bits (94), Expect = 8e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 151098 GCTGATCCGGCAGGCCAACGAGGGCCGCAAGCGAGGCGGCGGCATCAAGTTCGGCGAGAT 151157 ||||| |||||| ||| ||||||||||| || | |||||| | | |||||||| Sbjct 37380 GCTGACGCGGCAGCCCACCGAGGGCCGCAGCCGCGACGGCGGTCTGCGCCTGGGCGAGAT 37439 Query 151158 GGAGCGCGACTGCCTCATCGCGCACGGCGC 151187 |||||||||||||||||||||| ||||||| Sbjct 37440 GGAGCGCGACTGCCTCATCGCGTACGGCGC 37469 >seq108 Length=109627 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 151105 CGGCAGGCCAACGAGGGCCGCAAGCGAGGCGGCGGCATCAAGTTCGGCGAGATGGAGCGC 151164 |||||| ||| | ||||||||||| |||||||||||| || ||||||||||||||| Sbjct 66804 CGGCAGCCCATCAAGGGCCGCAAGTTTGGCGGCGGCATCCGCTTTGGCGAGATGGAGCGC 66745 Query 151165 GACTGCCTCATCGCGCACGGCGCGGCCAAC 151194 |||| || | |||||||| || ||| || Sbjct 66744 GACTCGCTGCTGGCGCACGGAGCCGCCTAC 66715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608744367375600