Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq32 87.8 2e-12 >seq32 Length=161680 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 11627 AAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTT 11686 || |||||||| || || |||| ||| ||||| | | || || ||||| ||||| || Sbjct 59405 AAGCACGCAAAGTCGCAGTGTAGACCCTCGTCCCGAGAGATGAGCTCATTTGAAAAGGTG 59464 Query 11687 AATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCA-AATGAACCAGAAAA 11745 | || ||||| | || |||||||| | ||| || || || ||| ||||| || || || Sbjct 59465 AGCCCCGGCATGAGCCCGCGTTTTTTGAGCCAGAAGATGGC-GCAGAATGAGCCCGAGAA 59523 Query 11746 GAATATTCCCTCCACAGCTGCAAATGCTAC 11775 || || ||||| || ||||||||||| || Sbjct 59524 AAAGATGCCCTCGACCGCTGCAAATGCCAC 59553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468484448301600