Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq367 84.2 2e-11 >seq367 Length=69066 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || ||||||| | | ||| | || || ||||||||||| ||||||||||| |||||| Sbjct 68806 CCACCGCGCAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGCC 68865 Query 48560 A-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCC 48613 | | || || |||||||||||||||| ||| || | || | |||||||| ||| Sbjct 68866 AGAGTG-CGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 68919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421215826746890