Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq2489 104 3e-17 >seq2489 Length=12514 Score = 104 bits (114), Expect = 3e-17 Identities = 145/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 126181 GTGTAAATGTAGCGGGGAGCT-GCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 ||||||||||| | | | ||| || | || ||||| |||| ||| || ||||| ||||| Sbjct 7509 GTGTAAATGTAAC-GCGCGCTGGCAGCGTCTTTGCCGCCCTGCAAACGTGTGCCGAACTG 7451 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGAC 126299 |||| || | || || | | |||||| |||||||| ||||| || | ||||| Sbjct 7450 ACCGCTGGGATGCAGCAGGTTGATGTTGTTGCTGCCCACAAATTCCTGTGCCAGGTTGAC 7391 Query 126300 AATGG-TCTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGC 126358 ||||| || || |||| |||||||||| || | ||| || | || |||||||| || Sbjct 7390 AATGGCGCTAGC-CAGGCTCTGCTCGCCATGGTGATAGGCGCTGTGTTCGGCCACATATG 7332 Query 126359 CGCTCAGCTGCGCAACCT 126376 || |||||| ||||||| Sbjct 7331 CGGACAGCTGGGCAACCT 7314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611339343864000