Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq222 163 5e-35 seq1593 125 1e-23 seq3574 123 5e-23 seq5217 122 2e-22 seq4354 122 2e-22 seq4349 122 2e-22 seq4011 122 2e-22 seq2794 122 2e-22 seq2562 122 2e-22 seq1785 122 2e-22 seq675 118 2e-21 seq4034 98.7 2e-15 seq1127 98.7 2e-15 seq3216 93.3 8e-14 seq1701 93.3 8e-14 seq1357 93.3 8e-14 seq2126 89.7 9e-13 >seq222 Length=84561 Score = 163 bits (180), Expect = 5e-35 Identities = 412/617 (67%), Gaps = 17/617 (3%) Strand=Plus/Plus Query 31701 CACACCGCCGTTTCGTCCGTAGAAGTGTATTCGACAATCTCGGCACAAAGATTGCTGCCC 31760 || |||||||| ||||| | ||||| |||| ||||| | || || ||||||| | Sbjct 74399 CAGACCGCCGTCTCGTCGGGGCTGGTGTACTCGAGGATCTCCGTGCAGAGGTTGCTGCAC 74458 Query 31761 GTGATGGTGCCGGCATTGGACTGCATGTTCTTCACGTTCACGCTGTCCTTGTTGAGCACG 31820 |||||||||| || ||| || |||| ||| | ||||||| |||| | Sbjct 74459 TTGATGGTGCCCAGATGTTGCTGGTTGCTCTTGCGGTTGCAGGAATCCTTGTATAGCATG 74518 Query 31821 TAAGGCATGCCCGTCTCGATCTGCGTGATGATCATCGCATTCCAGACATCGCGCGCTTTG 31880 || || | |||||||||||||||| | || ||| ||| | | | || | Sbjct 74519 TACGGGGTACCCGTCTCGATCTGCGCATCCAGGATGGCAAACCACAGCTGCTGGGCGCGG 74578 Query 31881 A-CGACTTTCTTCGCACGCCCCTCGGACTCGTAGCGAAGATACAGGTCCTCGTACTCCTT 31939 | || ||| | ||||||||||||| ||||||||| || || ||| |||| | Sbjct 74579 ATCGTCTTGCG-CGCACGCCCCTCGCGCTCGTAGCGCGTGTAGAGCCGCTCAAACTCGTC 74637 Query 31940 GCCAAAGGCATCGGTTAGACCGGGACACTCCTTGGGGTCGAAGAGCGACCATGCGACATC 31999 ||| || || | ||| || || ||| |||||| ||||||||||| | |||| Sbjct 74638 GCCCCAGCAGTCCGCTAGTCCAGGCGCCTCGTTGGGGCAAAAGAGCGACCACTCCGCATC 74697 Query 32000 GGCCTCTACTCGCTTCATGAACAGGTCGTTCAGCCACATCGCGTAAAACAGATTCCTGGC 32059 ||||| || |||| |||||| |||||||| | |||||| || |||| | ||| || Sbjct 74698 CGCCTCGACCCGCTGCATGAAGAGGTCGTTGACCCACATGGCAAGGAACA-AGTCC-CGC 74755 Query 32060 GCGTTGGGTCTCCTC---ACCCTGGTTACGTCGGAGCAGCAGGAAGTCCATGATGTCGGG 32116 ||| | | |||||| || ||||| || ||| | |||||| | ||||| | Sbjct 74756 GCG-CGCGACTCCTCTTTCCCGTGGTTCTTGCGCAGCTCGATGAAGTCAAAAATGTCAGC 74814 Query 32117 GTGGTGGGGCTCGAGGTACACGGCGAAAGATCCCTTGCG---GCGACCCCCCTGGTTTGC 32173 ||| |||||| ||||| | ||| || | |||||||| | |||||||||| | Sbjct 74815 GTGCCAGGGCTCCAGGTAAATGGCAAACGCCCCCTTGCGCTTTCCGCCCCCCTGGTCCAC 74874 Query 32174 GTATGCAGATGTCGTGTCGT---ACACCTTCAGCATGGGTACGATGCCATCAGACTCGCC 32230 ||| | | |||||||| | || |||||||||||||||||| | ||| ||| Sbjct 74875 GTA---ACGCGCCGTGTCGTTAAAGACGCGCAGCATGGGTACGATGCCGTTGGACGTGCC 74931 Query 32231 ATTGGTCCCCTGGATCTTGGAACCACGGCCGCGAATGTCGCTCAGGTGCAGGCCGATGCC 32290 ||||| || |||| | ||| || | | || |||||| | | |||||||||||| Sbjct 74932 GTTGGTGCCGCGGATATAGGAGCCGGTGGCACGGATGTCGTGAATGGACAGGCCGATGCC 74991 Query 32291 GCCACCAAACTTGGAAA 32307 || | |||||||| Sbjct 74992 ACCCGCGTTCTTGGAAA 75008 Score = 140 bits (154), Expect = 6e-28 Identities = 144/187 (77%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 94075 GGTGA-TCAGGTCACCGTTACGGGAGATCTGGGTGCTGACCTTGTTGCCGAAGCCAACGG 94133 ||||| | ||||| ||||| || |||| | | | ||||| ||| |||| || | | Sbjct 63282 GGTGAATGAGGTCGCCGTTGCGACTGATCGTGCAGGTCACCTTCTTGTTGAAGTCACCCG 63341 Query 94134 AACCGTTGATGGTCTGCTGAATGGACTCAACGGCGAAGTTGGTGTAGCGGCGGTACACGG 94193 | ||||||| ||||| |||||||| | ||| |||||||||| ||||| |||||| Sbjct 63342 AGCCGTTGAACACCTGCTCGATGGACTCCATGGCAAAGTTGGTGTGACGGCGATACACGA 63401 Query 94194 TCTTGAAGAAAGTAATCTGGGGGTTGCCAGTCAGGTACACGTCCTGGGCACCATAGGCGA 94253 |||||| || || ||||||||||||||||||||||| | |||||| ||||| || |||| Sbjct 63402 CCTTGAAAAACGTGATCTGGGGGTTGCCAGTCAGGTAGATGTCCTGAGCACCGTAAGCGA 63461 Query 94254 CGAGCTG 94260 |||| || Sbjct 63462 CGAGTTG 63468 Score = 129 bits (142), Expect = 1e-24 Identities = 260/384 (68%), Gaps = 30/384 (8%) Strand=Plus/Plus Query 93478 CCAGGCCAGGTACTTGGTGGGGTGGTTGAAGTTCATGCGGATGTTCTGGCTGGCCTGGGT 93537 |||| | || | |||||||||||||||||||||||| ||| || | | Sbjct 62629 CCAGACGAGCTCCTTGGTGGGGTGGTTGAAGTTCATCTTGATCTTGT------------T 62676 Query 93538 GGTGGTGGAGATGGTGGCAGTCTCGGAGCCGGTGAACTGCAGCTGCTCGATCAGGTACTC 93597 | ||||| | ||||| |||| ||||||||||||||||||||||| |||||||| Sbjct 62677 GTTGGTGTTGCTGGTGC---TCTCATCACCGGTGAACTGCAGCTGCTCGATGAGGTACTC 62733 Query 93598 GTGGGGCAGCTGGGCGAAGCGAGTGCGCTCCTGGGTGTCCAGGAAAATGTAGTCCAC--- 93654 ||||| | |||||||||||| |||||| | |||||| ||| | |||||||| || Sbjct 62734 GTGGGAGACCTGGGCGAAGCGGCGGCGCTCGTCGGTGTCGAGGTAGATGTAGTCGACAAA 62793 Query 93655 ---GTACACGGACATCTG---GGGAGCGGTCACGGTGGCACCGTTGGCG---AAGCCGGA 93705 || ||| || | | | || | |||| || ||||| | || | Sbjct 62794 GAGCGACGCGGCCACCAGGCTGCCCACGCTGACGGCGGACAGGTTGGTGGTCCAGTTGCC 62853 Query 93706 GGTGGAGCCGGAAGCGTTGGCGG--TGATACCGTTCACGGAGGACG-CGAGCGTGAAGTA 93762 | ||| | ||| || || ||| ||| | || | | || || | || || Sbjct 62854 GCTGGCGTCGGGGCCGGTGCCGGCCCAGTACAGGCTGCGCACGTCGTTGAACTCGATGTT 62913 Query 93763 GAGCTTCACTTCGTGGTACTGCAGGGCGATCAGGGGCAGGGCCAGGCCGGGGGTCTGGTT 93822 || |||||| ||||||||||| |||||||| |||||||| |||||||||||| | || Sbjct 62914 GATCTTCACCTCGTGGTACTGGAGGGCGATGAGGGGCAGCGCCAGGCCGGGGTTGCGGCA 62973 Query 93823 GAAGAAGAAGATCAGGGGCACGTA 93846 ||||||||| |||||| | ||| Sbjct 62974 GAAGAAGAACTCCAGGGGGATGTA 62997 Score = 109 bits (120), Expect = 1e-18 Identities = 104/132 (79%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 52277 CCAC-CATGGTGTTGTAGCCCTGCAGGTGCTCGGCGGTCTCGGTGAGCTCGCTCCAGATG 52335 |||| |||| || ||||||| || |||| ||||||||| |||||||||| ||||||| Sbjct 63071 CCACACATGTTGGCGTAGCCCAGCTGGTGGCCGGCGGTCTGGGTGAGCTCGGACCAGATG 63130 Query 52336 TCCCACCACTCGCTGTAGTGCTTGTCAATGCGCTGGCCACCAAGCTGGAGCTCGACTGAG 52395 | ||| || | |||||||||||| |||||||||||||| | || |||||||| || Sbjct 63131 TGGATCCAGTCACCGTAGTGCTTGTCGATGCGCTGGCCACCGATCTCAAGCTCGACGGAC 63190 Query 52396 TTGAACAGCGCG 52407 |||| || ||| Sbjct 63191 TTGATGAGGGCG 63202 >seq1593 Length=23154 Score = 125 bits (138), Expect = 1e-23 Identities = 126/160 (79%), Gaps = 3/160 (2%) Strand=Plus/Plus Query 225009 TGTCCAGGTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGT 225068 |||||||||| ||||| | |||||||| || ||||| || ||||| || ||||||| || Sbjct 11748 TGTCCAGGTGCTTCTCCAGGTGGTGGAAGGCGTGCTGCGCCACGTAGGCGATGCGCAGGT 11807 Query 225069 TGGGATGCTTCCACACAGAGCCCCGAGTCGGT-TGTGCCTCGCCGGTGAGGACCTTGATG 225127 |||| |||||||| || | ||| || ||| | ||||||||||||| |||||||| Sbjct 11808 TGGGGTGCTTCCAGACCGTGCCG-GACACGGGCTCCACCTCGCCGGTGAGCACCTTGATC 11866 Query 225128 AGCGTAGTCTTGCCCGCACCATTGGGGCCAAT-CACGCCA 225166 ||||| ||||||| || || |||||||| || || |||| Sbjct 11867 AGCGTGCTCTTGCCGGCGCCGTTGGGGCCGATGCAGGCCA 11906 Score = 113 bits (124), Expect = 8e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 224392 CTTACCCCCGCCAACCGTCCACATTTCAGAGCACGTCTTCTTCACGAATTCAGTGCTGTG 224451 ||| || ||||| || ||||| ||| |||| | | ||||| || || ||| Sbjct 10429 CTTGCCGCCGCCGACGATCCACCGCTCATTGCACAGCGCCGAGACGAACTCGTTGTGGTG 10488 Query 224452 AGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAGCGA 224511 || || || || | ||||||||||| || | ||| | |||||||| ||||| Sbjct 10489 CGAGATGACGACGATGCCGCCGCCGAACTCCTTGATGGCACCCGCCAGCGCGCCGAGCGA 10548 Query 224512 CTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCACAG 224571 |||||||| ||| |||| || ||||| ||||| | ||| | ||||||| ||||||| Sbjct 10549 GTCGCGGTCCAGGTAGTTTGTGGGCTCGTCCAGCACGATCAGGTGGGGGTTCTGCCACGT 10608 Query 224572 GGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATC 224623 ||| || | | ||| | |||||||||||| || || || || ||||||||| Sbjct 10609 GGCCGCGGCCAGCACGACCTTCACCTTCTGGCCACCCGACAGACCGCGGATC 10660 Score = 96.9 bits (106), Expect = 6e-15 Identities = 125/170 (74%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 225829 CAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGAT 225888 || |||||| || ||||| ||||| | || || ||||||| |||||||||| ||| Sbjct 13414 CACCTGGCCGTTGGCAATGGCACGCATGAGCGTCGACTTGCCCACGCCGTTGGGGCCGCA 13473 Query 225889 GAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGA-GTTCAGGAGGATCTTGC 225947 |||||||| | || ||||| | | || |||| | ||| || || |||||| Sbjct 13474 CAGGCCGTAGCGGCGGCCACGCTTCAGGCGCAG-CGCGGCGTTGTTGAGCAGAATCTTGG 13532 Query 225948 CACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTCG 225997 |||| || || || ||||||||||| | |||||| ||||| ||||||||| Sbjct 13533 CACCGTACGCCAGCGAGAACTCGCAGTTGCACAGCTCCTCGCCCTCCTCG 13582 >seq3574 Length=6273 Score = 123 bits (136), Expect = 5e-23 Identities = 116/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 10253 GTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCC 10312 ||| |||||||||||||||||||||| ||||||||| || || ||||||||||| || Sbjct 5801 GTGCAGGCCCTCGTCGCGGCTGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCC 5742 Query 10313 CCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGACCCTCCACGCA 10372 || || |||||||| |||| |||||| || |||||||| | | ||||||||| Sbjct 5741 ACGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAAAAGATGCCCTCCACGGC 5682 Query 10373 CACCCAGGCGACGAGGCGCTCTGCGAAG 10400 | | |||| ||||||||||| | |||| Sbjct 5681 CGCGAAGGCCACGAGGCGCTCGGAGAAG 5654 >seq5217 Length=2299 Score = 122 bits (134), Expect = 2e-22 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1622 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1563 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 1562 CCCACATTGGGC 1551 >seq4354 Length=3902 Score = 122 bits (134), Expect = 2e-22 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 529 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 470 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 469 CCCACATTGGGC 458 Score = 122 bits (134), Expect = 2e-22 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 3598 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3539 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 3538 CCCACATTGGGC 3527 >seq4349 Length=3913 Score = 122 bits (134), Expect = 2e-22 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 136 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 195 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 196 CCCACATTGGGC 207 >seq4011 Length=4860 Score = 122 bits (134), Expect = 2e-22 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1993 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1934 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 1933 CCCACATTGGGC 1922 Score = 122 bits (134), Expect = 2e-22 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 4703 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4644 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 4643 CCCACATTGGGC 4632 >seq2794 Length=10408 Score = 122 bits (134), Expect = 2e-22 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 10101 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 10042 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 10041 CCCACATTGGGC 10030 >seq2562 Length=12006 Score = 122 bits (134), Expect = 2e-22 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 185 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 244 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 245 CCCACATTGGGC 256 >seq1785 Length=20350 Score = 122 bits (134), Expect = 2e-22 Identities = 70/72 (97%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 145 GCCCGGTTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 204 Query 84516 CCCACATCGGGC 84527 ||||||| |||| Sbjct 205 CCCACATTGGGC 216 >seq675 Length=48933 Score = 118 bits (130), Expect = 2e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 |||||||| ||||| |||||||| ||| |||| || ||||| ||||| | | | || Sbjct 32661 AGCGCGCCGAGCGAGTCGCGGTCCAGGTAGTTGGTGGGCTCGTCCAGCACCAGCATATGC 32720 Query 224558 GGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCG 224617 ||||| |||||||| || || | | ||||||||| |||||||| ||||| || |||||| Sbjct 32721 GGGCAGTGCCACAGCGCCGCCGCCAGCACCAGCTTGACCTTCTGGCCGCCCGACAGGCCG 32780 Query 224618 CGGATCCGCGAGTGAGTCGTGAATTCGGGGTCAAGACC 224655 ||||| |||||| || ||| ||||| || || || Sbjct 32781 CGGATGGCCGAGTGCGTGCCGAACTCGGGCTCCAGGCC 32818 Score = 87.8 bits (96), Expect = 3e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 224956 CTCCAGGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAG 225015 |||| ||||| ||| | | || | || | |||||||||||||||| || |||||||| Sbjct 35150 CTCCTTGTCCTCGCCCTTGCCGTATCTCCGCCGGATGTACTGGTTGGGCGTGATGTCCAG 35209 Query 225016 GTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATG 225075 ||||| ||| | ||||| | || |||||| | ||| |||| ||||| |||| || Sbjct 35210 GTGGTCCTCCAGGTGGTGCAGCGCGTGCTGGCTCATGTAGGCCACGCGCACGTTGACGTG 35269 Query 225076 CTTCCACACAGAGCCC 225091 |||| |||| | |||| Sbjct 35270 CTTCGACACCGTGCCC 35285 >seq4034 Length=4767 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||| ||||||||||| || ||||||||| ||| || ||||||| ||||| ||||| Sbjct 1752 CCTTCTTTGTCTTGAATTTTCGCCTTGACGTTCTCTATTGTGTCTGACGATTCCACTTCA 1693 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||| || || || || |||||||| |||||||| ||||| Sbjct 1692 AGAGTGATCGTCTTCCCGGTAAGGGTCTTAACGAATATTTGCAT 1649 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 68241 CGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTC 68300 || ||||||| |||| ||| |||||| ||| || |||||||| || || | || || Sbjct 2003 CGCAGGCGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGCTAGCGTG 1944 Query 68301 CTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCT 68360 | |||||| || | |||||||||||| || || || | || ||||| || ||||||||| Sbjct 1943 CGCCCATCCTCGAGCTGCTTCCCGGCAAAGATTAGCCGCTGCTGGTCCGGGGGAATGCCT 1884 Query 68361 TCC 68363 || Sbjct 1883 GCC 1881 >seq1127 Length=32976 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||||| || |||||||||||| | || || || || Sbjct 608 CCCTCCTTGTCCTGGATCTTCGCCTTAACATTCTCGATGGTGTCCGAGGACTCCACCTCG 667 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||||| || |||||||||||||||||||| |||||||| Sbjct 668 AGCGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 711 >seq3216 Length=7998 Score = 93.3 bits (102), Expect = 8e-14 Identities = 143/203 (70%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 281022 GTACACAGCGGAGTTGTTGGCCAGGGCCCTGTGCGGAGCAGTCTCCCACCATGGGCCACT 281081 |||||| ||| |||||||||||| |||| |||||| | ||||||||| | ||| Sbjct 6469 GTACACCGCGCTGTTGTTGGCCAGTGCCCGGTGCGGCGTGTCCTCCCACCAGGCGCCCGC 6410 Query 281082 CTTCGCGCTGCGCATGCGGTCGTCGTCCAGGTCGCTCAGACTGATCATCGCAGACCTGCG 281141 ||| || | ||||||| |||| | ||| |||||| || ||||| | ||| |||| || Sbjct 6409 CTTGGCTCCGCGCATGTCGTCGCAGGCCACGTCGCTGAGGCTGATGAGCGCGGACCGCCG 6350 Query 281142 AACGCCTCCGGATACGACTATCTCCCCAATCTTGCACATAATATCATGGCATTCAAGAGT 281201 ||||| || || || ||||| | | |||||||| | || || || || | Sbjct 6349 CACGCCGCCCACCACCACGATCTCGGCCACCTTGCACACCAGGTCGTGCGCCTCCAGGGG 6290 Query 281202 CGTGAGCTTCCTGCCTGCGGCCC 281224 ||| |||| || ||| |||| || Sbjct 6289 CGTCAGCTGCCGGCC-GCGGGCC 6268 >seq1701 Length=21568 Score = 93.3 bits (102), Expect = 8e-14 Identities = 143/203 (70%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 281022 GTACACAGCGGAGTTGTTGGCCAGGGCCCTGTGCGGAGCAGTCTCCCACCATGGGCCACT 281081 |||||| ||| |||||||||||| |||| |||||| | ||||||||| | ||| Sbjct 5962 GTACACCGCGCTGTTGTTGGCCAGCGCCCGGTGCGGCGTGTCCTCCCACCAGGCGCCCGC 5903 Query 281082 CTTCGCGCTGCGCATGCGGTCGTCGTCCAGGTCGCTCAGACTGATCATCGCAGACCTGCG 281141 ||| || | ||||||| |||| | ||| |||||| || ||||| | ||| |||| || Sbjct 5902 CTTGGCTCCGCGCATGTCGTCGCAGGCCACGTCGCTGAGGCTGATGAGCGCGGACCGCCG 5843 Query 281142 AACGCCTCCGGATACGACTATCTCCCCAATCTTGCACATAATATCATGGCATTCAAGAGT 281201 ||||| || || || ||||| | | |||||||| | || || || || | Sbjct 5842 CACGCCGCCCACCACCACGATCTCGGCCACCTTGCACACCAGGTCGTGCGCCTCCAGGGG 5783 Query 281202 CGTGAGCTTCCTGCCTGCGGCCC 281224 ||| |||| || ||| |||| || Sbjct 5782 CGTCAGCTGCCGGCC-GCGGGCC 5761 >seq1357 Length=27981 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||||| || |||||||||||| | || || || || Sbjct 4330 CCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGACGACTCCACCTCG 4389 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| || || |||||||||||||| || ||||||||||| Sbjct 4390 AGGGTGATCGTCTTGCCCGTGAGGGTCTTCACAAATATCTGCAT 4433 >seq2126 Length=15993 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| |||||||| ||||| || |||||||||||| | || || || || Sbjct 625 CCCTCCTTGTCCTGAATCTTGGCCTTCACATTCTCGATGGTGTCCGAGGACTCCACCTCG 684 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||| || || ||||| |||||||| ||||| |||||||| Sbjct 685 AGCGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921543025270800