Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq4034 87.8 1e-12 >seq4034 Length=4767 Score = 87.8 bits (96), Expect = 1e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 101366 CCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCA 101425 |||||||| ||||||||||| || || | |||| ||||| |||| |||||||||| Sbjct 1752 CCTTCTTTGTCTTGAATTTTCGCCTTGACGTTCTCTATTGTGTCTGACGATTCCACTTCA 1693 Query 101426 AGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGG 101471 ||||||| ||| || ||||| | || || || ||||| ||||||| Sbjct 1692 AGAGTGATCGTCTTCCCGGTAAGGGTCTTAACGAATATTTGCATGG 1647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396245123759730