Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq32 84.2 2e-11 >seq32 Length=161680 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTT-TGCGGCCATATTTTG 44193 || || ||||||| || || ||||| || || || || || || |||| |||| || || Sbjct 59553 GTGGCATTTGCAGCGGTCGAGGGCATCTTTTTCTCGGGCTCATTCTGCG-CCATCTTCTG 59495 Query 44194 GTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGA 44253 | | || ||||| || | ||||| ||| | || |||||||||||| | || ||| || Sbjct 59494 GCTCAAAAAACGCGGGCTCATGCCGGGGCTCACCTTTTCAAATGAGCTCATCTCTCGGGA 59435 Query 44254 TGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 || || |||| ||||| ||||| ||||| Sbjct 59434 CGAGGGTCTACACTGCGACTTTGCGTGCTT 59405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397422624874450