Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= NC_028676.1 Length=149218 Score E Sequences producing significant alignments: (Bits) Value seq32 82.4 7e-11 >seq32 Length=161680 Score = 82.4 bits (90), Expect = 7e-11 Identities = 132/187 (71%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 119677 AGCTGCTCTTTCACCTGGTCGAAGTGATTGAGGTAGATGTGCGTGTCTCCGAAGCTGCCG 119736 |||||||| ||||||||||| | || || || |||| ||||||||| || |||| | Sbjct 93023 AGCTGCTCATTCACCTGGTCCACATGGTTCAGATAGACGTGCGTGTCGCCCGTGCTGATG 92964 Query 119737 ATCAGTTCGCCGACTTCGAGATTGCA-TTCTCGAGCAATGATGTGAGTCAGAAGAGCGTA 119795 || || || | |||| | || ||| || || || | ||| || |||| || ||||| Sbjct 92963 ATGAGCTCATCCGCTTCCATATCGCACTTGGCG-GCGAGGATATGCGTCAACAGCGCGTA 92905 Query 119796 CGACGCGATGTTGAACGGAAGACCGAGGAACACATCGACTGACCTCTGGTTCCAGATGCA 119855 ||| | |||||||| | || || ||||| || |||||| ||||| | | ||| Sbjct 92904 CGATGGGATGTTGATGGCCAGCCCCAGGAAGCAGTCCGCTGACCGCTGGTACATGTGGCA 92845 Query 119856 CGAGAGC 119862 ||| ||| Sbjct 92844 CGAAAGC 92838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477328486543200