Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016- 04-26] 6,890 sequences; 122,189,241 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq3746 836 0.0 seq6015 691 0.0 seq4778 387 2e-102 seq3788 277 2e-69 seq3723 123 3e-23 >seq3746 Length=5590 Score = 836 bits (926), Expect = 0.0 Identities = 1485/2148 (69%), Gaps = 41/2148 (2%) Strand=Plus/Minus Query 184988 TTTCCAAAATTTAATCAAGATTTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGA 185047 ||||||||||||| |||| | | ||| || |||||||| | || | ||||| || Sbjct 4723 TTTCCAAAATTTAGCCAAGGTCTAGCACAAGACCCTACAACACGTCGAATTTGGTACGGG 4664 Query 185048 TTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTTATATCAA 185107 | |||| || ||||||||||| || ||||| |||||| ||||| || | || ||| Sbjct 4663 CTTGCAATGGCCCATGACTTTGAAAGCCATGATGGTATGACTGAAGAAAATCTTTACCAA 4604 Query 185108 AAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAAT 185167 || | |||||| | ||||||||||| | ||||||| || ||||| |||||||| Sbjct 4603 AAGATTTTTGCTTCGCACTTTGGTCAATTATCAATTATTTTCTTATGGACGTCAGGTAAT 4544 Query 185168 TTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACATGTG 185227 | | || | ||||||||||||||||||||||| | ||| |||| ||| ||| | Sbjct 4543 CTTTTCCACGTTGCATGGCAAGGTAACTTTGAACAATGGGTAACAGATCCAGTTCATATT 4484 Query 185228 ATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCAAGGTGCAACAGATGCATAC 185287 || || ||||| ||| ||||| || || ||||||||| || ||| || | | Sbjct 4483 CGTCCAATTGCACACGCAATTTGGGACCCACACTTTGGTCAACCAGCTGTAGAAGCTTTC 4424 Query 185288 ACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTAT--TCTGGACTGTATCATTGGT 185345 |||| | ||| || || || || || | ||| | || || | || || |||| Sbjct 4423 ACACGTGGTGGTGCTTCTGGGCCAGTAAATA--TTGCAACATCAGGTGTATACCAATGGT 4366 Query 185346 GGTACACAGTTGGTATGAGAACTAATATGCAAC-TGTATACTGGTGGTGCATTTATGATT 185404 |||| || |||||||| | || || ||| | |||| || ||| || || | | Sbjct 4365 GGTATACTATTGGTATGCGTACAAAC---CAAGATTTATA-TGTAGGTTCAGTTTTCTTA 4310 Query 185405 CTACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATC---TGAAACCAAAGTTTGCA 185461 |||| || | | ||| ||| |||| | | || | ||||||| || | Sbjct 4309 GCTCTAGTATCAGCACTTTTCCTTTTTGCTGGCTGGCTTCACTTACAACCAAACTTCCAA 4250 Query 185462 CCTAAGCTTGCTTGGTTTAAAGATAATGAGAACAGATTAAATCATCATCTATCAGTTCTA 185521 ||| ||| |||||||||||||| ||| | |||||||| || || |||| | || Sbjct 4249 CCTTCACTTTCTTGGTTTAAAGATGCTGAATCTCGTTTAAATCACCACCTTTCAGGTTTA 4190 Query 185522 TTTGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCATCA 185581 ||||| | || || | || ||| ||||||| || ||||||||||||| || | |||| Sbjct 4189 TTTGGGGTTAGCTCATTAGCGTGGACTGGTCACTTAGTACACGTAGCAATTCCAGAATCA 4130 Query 185582 AGAGGA-ATCACTGTAGATTGGACTAATTATGTGTTTATGAAACCTCATCCTGCAGGTTT 185640 | || | ||| || | |||| ||||| ||| | |||||| || |||||| Sbjct 4129 CGTGGTCAACAC-GTTGGTTGGGATAATTTCCTGTCAGTTTTACCTCACCCACAAGGTTT 4071 Query 185641 ACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGATTAAATCA 185700 | |||||||||||||| || |||| || |||||||||| ||| || | || || Sbjct 4070 AACACCATTCTTTACAGGTAATTGGGCTGCATATGCACAAACTCCAGACACAGCAAGCCA 4011 Query 185701 AATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTCATGGGTGGTTTCCA 185760 | || ||| | | |||||||| ||| || ||||| ||| | ||||||||||| Sbjct 4010 TGTTTTTGGTACTGCTCAAGGTTCTGGTCAAGCCATTTTAACTTTCTTAGGTGGTTTCCA 3951 Query 185761 TCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGAGT 185820 ||||||||| | |||||| | |||||||| || || || ||| | || || | || Sbjct 3950 CCCACAAACACAAAGTTTATGGCTAACTGATATGGCTCACCACCACTTAGCTATTGCTGT 3891 Query 185821 AATATTCATTATTGCAGGTCATATGTA---TAGAAGTGCTTGGGGTATTGGTCACTCAAT 185877 ||| |||||| | || ||||| ||||| || || ||| || |||||||||| || Sbjct 3890 AATTTTCATTGTAGCTGGTCACATGTACCGTACAAA--CTTTGG-TATTGGTCACCGTAT 3834 Query 185878 GAAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAGG 185937 | | | || ||||| || || |||||||| ||| || ||||||| ||||| ||||| Sbjct 3833 GCAAGCAATTCTTGATGCGCACACACCACCTCAAGGCGGGTTAGGTGCCGGTCACAAAGG 3774 Query 185938 ATTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCT 185997 | | ||| ||||| | |||| |||||| | || |||||| | || ||||| || | Sbjct 3773 TATTTTTGATACAGTAAACAACTCGTTACACTTCCAATTAGGTTTAGCGCTTGCTTCGGT 3714 Query 185998 AGGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCTATGCTTTCAT 186057 ||| || | ||| || |||||||| ||||| | | || | ||||| ||| Sbjct 3713 TGGTACAATTTGTTCTCTAGTAGCACAACACATGTATGCTTTACCTCCTTATGCATTCCA 3654 Query 186058 AGCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCAACTGC 186117 |||| | ||| || ||||||||| |||| ||| || ||||| |||||| | Sbjct 3653 AGCAATTGACTTTACAACACAAGCTGCTTTATACACTCACCACCAATATATTGCAGGTTT 3594 Query 186118 TCTGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTAC 186177 | ||| |||||||||||| || || || || || || || | || | ||||| Sbjct 3593 CATTATGTGTGGTGCTTTTGCTCACGGTGCTATTTTCTTCATTCGTGATTACGATCCAGA 3534 Query 186178 TCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTCA 186237 | || || | || ||| | | | | ||||| | || |||||||| | || ||| Sbjct 3533 ACAAAACAAAGGTAACGTTTTAGCTCGTATGCTTGACCATAAAGAAGCTGTAATTTCTCA 3474 Query 186238 CTTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATGA 186297 |||||||||||| || |||||||||| ||||| || ||||| | ||||| ||||| || Sbjct 3473 CTTAAGTTGGGTTTCTTTATTCCTTGGTTTCCACACATTAGGTCTTTATGTACATAACGA 3414 Query 186298 TGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCACA 186357 ||| | || |||||| ||| || | ||| || |||||||||||| | ||||| || Sbjct 3413 CGTAATGCAAGCTTTTGGTACTCCAGAAAAACAAATCTTAATTGAACCTGTTTTTGCTCA 3354 Query 186358 GTGGATACAGGCAGCATCA-GGTAAGATGATGTATGGATTAAGTTTCTTACTATCTGATC 186416 ||||| || | || ||| ||||| | | ||||| || ||||||| ||||| | Sbjct 3353 ATGGATTCAAGGTGC-TCATGGTAAAGTTTTATATGGTTTTGATTTCTTATTATCTTCTA 3295 Query 186417 CAAATAGTGCTGC-AAGTCTAGCAG-CAGAGAGTATG----CCTGGTAATCATTACTGGA 186470 ||| ||||| || | | | | | || || |||| |||||| ||| Sbjct 3294 AAAACAGTGCAGCTTATGCAAACGGTCAAAGTTTATGGTTACCTGGT---------TGGT 3244 Query 186471 TGAGTGCTATGAATGATCAAACAAACAGTC--TGTTTCTACCAATAGGACCTGCTGATTT 186528 | ||||| ||| || ||| || | || | || || |||| || |||| ||| || Sbjct 3243 TAGAAGCTATTAATAAT--AACCAAAACTCATTATTCTTAACAATTGGCCCTGGTGACTT 3186 Query 186529 ATTAGTTCATCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGG 186588 | || || ||||| ||||| | || | || ||||||||||||||||| || || || Sbjct 3185 CCTTGTACACCATGCAATTGCTTTAGGTCTTCACACTACAACTTTAATCCTTGTAAAAGG 3126 Query 186589 TGCATTAGATGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATT 186648 ||| ||||||||| | ||||| ||| | || |||||||| |||||||| || ||| || Sbjct 3125 TGCTTTAGATGCTCGTGGTTCTAAATTAATGCCAGATAAAAAAGATTTTGGTTATAGTTT 3066 Query 186649 CCCTTGTGATGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTA 186708 ||||||||| ||||| || | || ||||||||||||| ||||| || ||||||||||| Sbjct 3065 CCCTTGTGACGGTCCTGGTCGTGGAGGTACTTGTGATATTTCTGCTTACGATGCTTTCTA 3006 Query 186709 TCTCTCTGTGTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAA 186768 | | |||| |||||| | || ||||| | |||| ||| |||||||||||||| Sbjct 3005 TTTAGCTGTATTCTGGATGCTTAACACAATTGGTTGGGTTACTTTCTATTGGCACTGGAA 2946 Query 186769 GAACCTTGCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATATCTTAT 186828 | | || ||||||||||| |||||||| || ||| ||| ||||| || Sbjct 2945 ACATTTAACTTTATGGCAAGGTAACGTAGCACAATTTGATGAGTCATCAACTTATCTAAT 2886 Query 186829 GGGTTGGTTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTACACACC 186888 ||||||||| | || || | ||| ||| | | | |||| | || || | || Sbjct 2885 GGGTTGGTTACGTGACTACTTATGGTTAAATTCTTCACAATTAATTAACGGTTATAACCC 2826 Query 186889 ATTTGGTATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAGTTTG 186948 |||||||||||||| ||| || |||||||||| |||| | |||||||| ||| | | Sbjct 2825 ATTTGGTATGAATAGTCTAAGCGTTTGGGCATGGACGTTCCTATTTGGTCACTTAATCTA 2766 Query 186949 GGCAACAGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTGAGAC 187008 ||||| || ||||||||||| || |||||| | ||||| |||||||| |||||||| || Sbjct 2765 TGCAACTGGCTTTATGTTCCTAATCTCTTGGCGTGGTTACTGGCAAGAATTAATTGAAAC 2706 Query 187009 TCTTGCTTGGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGGAGAGATAAACC 187068 |||| ||||| || | | |||||| |||| || ||| |||| ||| ||||| Sbjct 2705 GCTTGTATGGGCTCACGAGAAGACTCCATTAGCTAACTTAGTTTACTGGAAAGACAAACC 2646 Query 187069 AGTGGCACTTTCTATTGTTCAAGCAAGACTAGTTGGTTTATCACATTT 187116 || || ||||| ||||||||||| | |||| |||||| | || || Sbjct 2645 GGTAGCTCTTTCAATTGTTCAAGCTCGTTTAGTAGGTTTAGCGCACTT 2598 >seq6015 Length=1491 Score = 691 bits (766), Expect = 0.0 Identities = 756/999 (76%), Gaps = 8/999 (1%) Strand=Plus/Minus Query 189655 ATGGCCTCAGTTCTGTGAGTGGGTAACATCAACAAACAATAGAATCTATGTTGGTTGGTT 189714 |||| ||| || ||||||||| | || ||||| | || | | || | |||||||| Sbjct 1360 ATGGGCTCGTTTTTGTGAGTGGATCACTTCAACTGAAAACCGTTTATACATCGGTTGGTT 1301 Query 189715 TGGTGTACTCATGATTCCATGCTTGCTCGCAGCAGCAGCATGCTTCGTTGTTGCATTTAT 189774 |||||| ||||||| || || | || | ||| || || ||| | | || || || Sbjct 1300 CGGTGTAATCATGATCCCTTGTCTTCTTACTGCAACATCAGTATTCATCATCGCTTTCAT 1241 Query 189775 TGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCACTTCTCTA 189834 || || || || |||||||| ||||| ||| | |||||||| | ||||| ||||| || Sbjct 1240 CGCTGCTCCGCCAGTAGACATCGATGGTATCCGTGAGCCAGTATCTGGTTCTCTTCTTTA 1181 Query 189835 TGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGTCTACACTT 189894 |||||||||||||| | |||||||| | || | || || ||||||||| ||||||| Sbjct 1180 CGGTAACAACATCATCACAGGTGCTGTAATCCCAACTTCTAACGCTATTGGTTTACACTT 1121 Query 189895 CTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGTCCTTACCA 189954 ||||||||| |||||||| || || | || |||||| | ||||| |||||||||||||| Sbjct 1120 CTACCCAATTTGGGAAGCTGCTACTCTTGACGAGTGGTTATACAACGGTGGTCCTTACCA 1061 Query 189955 GTTGGTAATCTTCCACTTCCTTATTGGTATCT-CAGCATACATGGGAAGACAGTGGGAAT 190013 | | | | ||||||||| | ||| | | | || |||||||| | ||||||||| Sbjct 1060 ACTAATCGTTTGTCACTTCCTTTTAGGTGTATACTGC-TACATGGGTCGTGAGTGGGAAT 1002 Query 190014 TATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTG 190073 |||| | | | |||||||| | || |||||| ||||||||| ||||| |||||| ||| Sbjct 1001 TATCTTTCCGTTTAGGTATGCGTCCATGGATCGCTGTTGCTTACTCAGCTCCAGTAGCTG 942 Query 190074 CAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATGC 190133 |||| || |||||| | || |||||| |||| || ||||||||||| |||||||||| Sbjct 941 CAGCTAGCGCTGTATTCTTAGTTTACCCAATTGGCCAAGGTTCATTCTCAGATGGTATGC 882 Query 190134 CTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACATAATATCC 190193 ||||||||||| ||||| |||||||||||| | ||||||||||| || || || |||| Sbjct 881 CTTTAGGTATCAGCGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCC 822 Query 190194 TTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTATTCTCTG 190253 |||||||||||||||| ||| |||||| || ||| | |||||||| |||||||||||| Sbjct 821 TTATGCACCCATTCCACATGTTAGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTG 762 Query 190254 CAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTAGAGTCAC 190313 ||||||| |||||| | || || || || ||||| | |||||||||| || ||| Sbjct 761 CAATGCACGGTTCATTAGTTACTTCATCGTTAATCCGTGAAACAACTGAAAACGAATCAG 702 Query 190314 AGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCTGCTCATG 190373 ||| | |||||| ||||| ||||||||||||||||||||||| ||||| ||||| | Sbjct 701 CTAACGAAGGTTACCGTTTTGGTCAAGAAGAAGAAACATACAACATCGTAGCAGCTCACG 642 Query 190374 GTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGTTTACACT 190433 ||||||| ||| | | |||||||| || ||||||||||||||||| | ||||||| Sbjct 641 GTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTTCATTACACT 582 Query 190434 TCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATTTGCACAA 190493 ||||| |||| | | || || | | || | ||||| ||| | | ||| ||| || | Sbjct 581 TCTTCCTAGCTGCTTGGCCAGTTATCGGTATTTGGTTCACAGCTTTAGGTCTTTCAACTA 522 Query 190494 TGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGTAAAA 190553 |||| |||||| | || ||||||||||| ||||| || || || || |||||||| Sbjct 521 TGGCTTTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGACTCACAAGGT---C 465 Query 190554 TTGT-TCCAACA--TGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTAATGC 190610 ||| | |||| |||| || | | ||| | || ||| | |||||||||||||||| Sbjct 464 GTGTATTAAACACTTGGGCAGACATCATCAACCGTGCTAACTTAGGTATGGAAGTAATGC 405 Query 190611 ATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTT 190649 | || | || || ||||||||||| |||||| |||||| Sbjct 404 ACGAGCGTAACGCTCACAACTTCCCTCTAGACTTAGCTT 366 >seq4778 Length=2992 Score = 387 bits (428), Expect = 2e-102 Identities = 953/1428 (67%), Gaps = 97/1428 (7%) Strand=Plus/Plus Query 183596 ACCTTTAAAGGTGGTTTGAATCCTGTAACTGGCAGTCTTTGGATGACAGATATAGCACAT 183655 || |||||||||||||| || |||||||| || |||| ||| | | |||| ||| || Sbjct 1304 ACATTTAAAGGTGGTTTAAACCCTGTAACAGGTGGTCTATGGTTAAGTGATACAGCTCAC 1363 Query 183656 CATCACCTAGCAATAGCAGTTATGTTTATCATTGCAGGTCATATGTATCGCACAAACTGG 183715 || ||| ||||||| || || | || | | || ||||| ||||| || ||||||||| Sbjct 1364 CACCACGTAGCAATTGCTGTATTATTCCTAGTAGCTGGTCACATGTACCGTACAAACTGG 1423 Query 183716 GGTATTGGTCAATCAATGAAAGAGATATTAGATGGTCAGAATGGTTTCC---CACAGGGT 183772 ||||| || || ||| || || | || | || |||| || |||||| | Sbjct 1424 GGTATCGGCCACAGCATGCGTGAAATTCTTGAAGCGCACCGTGGT--CCATTCACAGG-T 1480 Query 183773 GTCACACACAGAGGATTATATGAATTTCTAGCAGAATCAAGACATGCACAACTATCACTG 183832 | ||| || ||||||||| || || || ||| | || || ||| || | | Sbjct 1481 GAAGGTCACGTGGGCTTATATGAAATTTTAACAACTTCATGGCACGCTCAATTAGCTATT 1540 Query 183833 AATCTGGCAATGCTAGGATC--TATCAGTATCATAGTTTCACATCATATGTATGCAATGC 183890 || | || | | || || ||||| ||||| || |||| || |||||||| |||| Sbjct 1541 AACTTAGCTTTATTTGGTTCATTATCA--ATCATTGTAGCACACCACATGTATGCTATGC 1598 Query 183891 CACCTTATCCATATCTTGGTATTGAATA---TCCAACAGTAGTAGGATTATTCACCCATC 183947 | |||||||| ||| | | | ||| || | || |||| || |||||||| || | Sbjct 1599 CTCCTTATCCTTATTTAGCAACTGATTACGGTACA-CAGT--TATCTTTATTCACTCACC 1655 Query 183948 ATATGTGGATAGGTGGTTTTCTTATTGTGGGTGCATCAGCACATGCTTCAATTGCTATGA 184007 ||| ||||| |||||||| |||||| |||||| || || || | ||| ||| Sbjct 1656 ATACTTGGATTGGTGGTTTCTGTATTGTAGGTGCAGGTGCTCACGCAGCGATTTTCATGG 1715 Query 184008 TAAGAGACTATAATCCTGTTCAACATA--TGGGA-AATGTATTAGATAGAATACTTAAAT 184064 | | || ||| ||||| ||| ||| | | || | ||||| | || || Sbjct 1716 TTCGTGATTATGATCCTA--CAA-ATAACTATAACAACCTTTTAGACCGTGTAATTCGTC 1772 Query 184065 CTAGAGATGCAATCATCAGTCACTTGAACTGGGTATGCATCTTTTTAGGTTTTCATAGTT 184124 | ||||| || || |||||| |||||||| || || || ||||| || || || | Sbjct 1773 ACCGTGATGCTATTATTTCTCACTTAAACTGGGTTTGTATTTTCTTAGGCTTCCACAGCT 1832 Query 184125 TTGGTCTTTATATTCACAATGATATTATGAGAGCATTGGGTAGACCTAATGATCTATTCA 184184 ||||| | || |||||||| |||| ||||| || || ||| | ||| | ||| | ||| Sbjct 1833 TTGGTTTATACATTCACAACGATACAATGAGTGCTTTAGGTCGTCCTCAAGATATGTTCT 1892 Query 184185 GTGATACAGCAATACAATTACAACCTGTATTTGCACAGTCTGTTCAGAGATTACA-TGCT 184243 |||||||||||| ||| | ||||| |||||||| || | |||||| ||| | || Sbjct 1893 CTGATACAGCAATCCAACTTCAACCAGTATTTGCTCAATGGATTCAGAATACACACTTCT 1952 Query 184244 T----CATTATATAATGTCTCTGA-TGTATTTGGTGGATCAACCACAA------------ 184286 | | | | ||| ||| | || || | || ||| || Sbjct 1953 TAGCTCCTCAATTAACAGCTCCAAATGCTTTAGCTGCTACAAGTTTAACATGGGGTGGTG 2012 Query 184287 -------TG--GTTGGTGGTAAGATTGCTA--ATGCTCCTTTTGTACTAGGTACAGCAGA 184335 || || |||||||| |||||| |||| ||| || ||||||| | || Sbjct 2013 ATTTAGTTGCTGTAGGTGGTAAAGTTGCTATGATGCCTATTTCGT--TAGGTACTTCTGA 2070 Query 184336 CTTTATGATACATCACATACACGC-TTTCCAGATTCATGTTTGTGTATTAATTCTTCTCA 184394 ||| | | || || || ||||| ||| || ||||| || || |||||||| | | Sbjct 2071 CTTCCTAGTTCACCATATCCACGCATTTACA-ATTCACGTAACAGTTTTAATTCTATTAA 2129 Query 184395 AGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGTAAGTTAGGATTCA 184454 | |||||||||| | | | ||||| ||||| || ||||| || ||||| ||| Sbjct 2130 AAGGTGTTTTATTTGCACGTAGCTCACGTTTAATCCCTGATAAAGCAAACTTAGGTTTCC 2189 Query 184455 GATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATCAGGATGGGATCATG 184514 | ||||||||||| ||||||||| | ||||| || |||||||| || | |||||| || | Sbjct 2190 GTTTCCCTTGTGACGGTCCTGGTCGTGGAGGTACATGTCAGGTTTCTGCATGGGACCACG 2249 Query 184515 TATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAATCTTCCACTTTAGTT 184574 |||| | ||||||||||||||||| || || | ||||| || || |||||||| || | Sbjct 2250 TATTTTTAGGTTTATTCTGGATGTACAACAGCTTATCTATTGTTATTTTCCACTTCAGCT 2309 Query 184575 GGAGAATGCAA---GATGTATGGGGT-CTAT--------------------------CAG 184604 ||| |||||| ||||| |||||| || | ||| Sbjct 2310 GGAAGATGCAATCTGATGTTTGGGGTACTGTAACAGCTTCTGGCGTATCACACATTACAG 2369 Query 184605 GAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACTTCTTATGGT 184664 | ||||||||||| || || | | |||||||| || ||||| | || ||| | ||| Sbjct 2370 GTGGTAACTTTGCACAAAGCGCTAACACAATCAACGGTTGGTTACGTGATTTCCTTTGGG 2429 Query 184665 CACAG---TCAAGTCAAGTTCTCAATAGTTATGGACAAG--ACATCAGCATGTATGGTTT 184719 ||||| ||| || || || | ||||| || ||| || |||||| | Sbjct 2430 CACAGAGCTCA---CAGGTAATCCAGTCATATGGTTCAGCTCTATCGGC--TTATGGTCT 2484 Query 184720 GCTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGAGTGGTAG 184779 | || | || || || || |||||||||||| || |||||| ||| |||| | Sbjct 2485 AATCTTCTTAGGTGCTCACTTCGTATGGGCATTCTCGTTAATGTTCTTATTCTCTGGTCG 2544 Query 184780 AGGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTAAAACTTGC 184839 || || |||||||| | || || || |||| ||||||||| || ||||||||| |||| Sbjct 2545 TGGTTATTGGCAAGAACTTATCGAATCAATTGTTTGGGCACACAATAAATTAAAAGTTGC 2604 Query 184840 ACCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGAGTTGCACA 184899 || | || |||||| | || | ||||| ||||| |||||||| || ||||| || Sbjct 2605 TCCAGCAATCCAACCACGTGCTTTAAGTATTACGCAAGGTCGTGCTGTAGGTGTTGCTCA 2664 Query 184900 CT-TCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTC 184946 || |||| | || |||||||| ||||| ||| | |||||||| |||| Sbjct 2665 CTATCTT-TTAGGTGGTATTGCAACAACTTGGTCGTTCTTCTTAGCTC 2711 Score = 140 bits (154), Expect = 4e-28 Identities = 261/381 (69%), Gaps = 2/381 (1%) Strand=Plus/Plus Query 183008 TTTCAAGGTGCTAGGTTTTCAAACTATACAGGATGGTTGGCAGACCCAACTCATGTAAAA 183067 || || ||||| | ||||||||||| || ||||| || ||||| ||| | ||| Sbjct 752 TTCCATGGTGCACGTTTTTCAAACTACGAAGCTTGGTTAAGTGATCCAACACATATTAAA 811 Query 183068 CCTGGTGCTCAAGTGGTTTGGCCTATACTTGGTCAAGAGATATTGAATGGAGATCAGGGT 183127 || |||||||||| |||||||| | |||||||||| || | || || ||| ||| Sbjct 812 CCAAGTGCTCAAGTTGTTTGGCCAGTTGTTGGTCAAGAAATTCTAAACGGTGATGTTGGT 871 Query 183128 GCAGGATATCAAGGTATTAGAATTACATCTGGTTTATTTCAGATGTGGAGAGCATGGGGT 183187 | || | ||||||||| |||||| |||||||| || || | ||| | || | ||| Sbjct 872 GGTGGTTTCCAAGGTATTCAAATTACTTCTGGTTTCTTCCAATTATGGCGTGCTAGTGGT 931 Query 183188 ATAACAAATGAAACTCAAC-TAATGGCGCTAGCACTAGGTGCTTTAGTTATGGCAGCAGT 183246 || || | ||| |||| | || || || | |||| |||||| ||||| || | Sbjct 932 ATTACTAGCGAATTACAACTTTATACAACT-GCTATTGGTGGTTTAGTAATGGCTGCTGC 990 Query 183247 TATGTTTAATGCTGGTGCATTTCATTTTCACGTTGCTGCTCCTAAGTTATCATGGTTTCA 183306 ||||| ||||||| || |||| || ||||| || |||||| ||||| || Sbjct 991 AATGTTCTTTGCTGGTTGGTTCCATTACCATAAAGCTGCGCCGAAGTTAGAGTGGTTCCA 1050 Query 183307 GAATGTAGAATCTATGATGAATCATCACCTTGCAGGTTTGCTTGGTCTTGGTTCTTTAGG 183366 || || ||||||||| | || || ||| | | ||| | | ||| | ||| ||||| Sbjct 1051 AAACGTTGAATCTATGTTAAACCACCACTTAGGTGGTCTTTTAGGTTTAGGTAGTTTAGC 1110 Query 183367 ATGGGCAGGACATTTAATTCA 183387 ||||| || || |||||| Sbjct 1111 TTGGGCTGGTCACCAAATTCA 1131 >seq3788 Length=5474 Score = 277 bits (306), Expect = 2e-69 Identities = 383/538 (71%), Gaps = 21/538 (4%) Strand=Plus/Minus Query 191299 TCTATTCATTCAAGGTTTCCACAATATTACACTCAACCCTTTCCACATGATGGGAGTTGC 191358 |||||| | ||||||||||| || ||||| ||||| |||||||||||||| || || Sbjct 2750 TCTATTTTTCCAAGGTTTCCATAACTGGACACTGAACCCATTCCACATGATGGGTGTAGC 2691 Query 191359 AGGTATTCTAGGTGGAGCATTACTATGTGCCATTCATGGTGCTACAGTACAGAACACCTT 191418 ||| || ||||||| || ||| ||||||| ||||| |||||||| ||| | ||||| || Sbjct 2690 TGGTGTTTTAGGTGGTGCTTTATTATGTGCTATTCACGGTGCTACTGTAGAAAACACATT 2631 Query 191419 GTATGAGGACTCAAGCATCTATACAGATGGTCAAGTTCAAAGTACAACCTTTAGAGCATT 191478 | || ||||||| | | | | ||| | || | || || Sbjct 2630 ATTCGA------------------AGATGGTGACGGTGCTA--ACA-CGTTCCGTGCCTT 2592 Query 191479 TGATCCAACACAGGATGAGGAAACTTATTCTATGATCACTGCAAACAGATTCTGGTCACA 191538 | || ||||||| ||| |||||||| || ||| | || |||||| | ||||||||||| Sbjct 2591 CAACCCTACACAGGCTGAAGAAACTTACTCAATGGTAACAGCAAACCGTTTCTGGTCACA 2532 Query 191539 GATATTTGGTATTGCATTCTCTAACAAAAGATTTCTACACTTCTTGATGTTGTTTGTTCC 191598 || |||||| | || ||||||||||| | | |||||||||| ||| | || ||||| Sbjct 2531 AATTTTTGGTGTAGCTTTCTCTAACAAGCGTTGGTTACACTTCTTCATGCTTTTAGTTCC 2472 Query 191599 TGTAATGGGAATGTGGACATCATCAATAGGTATTGTAGGTCTTGCACTTAACTTAAGAGC 191658 || | ||| | |||| | ||||| |||| ||| | || |||||| | | || Sbjct 2471 CGTGACGGGGCTTTGGATGAGTGCTCTAGGTGTTGTTGGTTTAGCTCTTAACCTTCGTGC 2412 Query 191659 ATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTA 191718 ||||| || ||||| ||||| || | || || |||||||| ||||| ||||| ||||| Sbjct 2411 TTATGACTTCGTATCACAAGAAATCCGTGCTGCTGAAGACCCTGAGTTCGAAACTTTCTA 2352 Query 191719 TACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGATGTCTTCAGTAGACCAACC 191778 |||||| ||||| |||||||| |||||||| | || |||||| || | ||||||||| Sbjct 2351 TACTAAAAACATCCTTCTTAACGAAGGTATCCGTGCTTGGATGGCTGCGCAAGACCAACC 2292 Query 191779 TCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCTAGAGGAAATGCATTGTAATTT 191836 ||| || | || ||||| || ||||| |||| | || || || | |||||| Sbjct 2291 TCACGAACGTCTAGTATTCCCTGAAGAAGTATTACCGCGTGGTAACGCTCTATAATTT 2234 Score = 172 bits (190), Expect = 7e-38 Identities = 340/501 (68%), Gaps = 8/501 (2%) Strand=Plus/Minus Query 190793 TGGTTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCT 190852 |||||||||| |||||||||| || | || | || ||||| |||||||||| Sbjct 4502 TGGTTTGATGACGCTGATGACTGGCTACGTCAAGACCGTTTCGTATTTGTAGGTTGGTCA 4443 Query 190853 GGTCTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACA 190912 ||| | || | || || ||||||| | | || | ||||||||||| || || || || Sbjct 4442 GGTTTATTACTTTTCCCTTGTGCTTACTTTGCACTAGGTGGTTGGTTAACTGGTACAACT 4383 Query 190913 TTTGTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTT 190972 || || || |||||||||||||| | || |||| ||| | ||||| ||||| Sbjct 4382 TTCGTAACATCATGGTATACACATGGTTTAGCTACTTCTTACTTAGAAGGTTGTAACTTC 4323 Query 190973 TTGACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGG 191032 || || ||||| ||||| ||||||| | ||||| || | | |||| | ||| Sbjct 4322 TTAACTGCAGCTGTATCAACACCTGCAAACAGTATGGCACACTCTCTTCTATTTGTTTGG 4263 Query 191033 GGTCCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACTTT 191092 |||||||| || |||||| || ||||||| ||| ||||||| | ||| || Sbjct 4262 GGTCCAGAAGCTCAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGTTTATGGGCATTC 4203 Query 191093 GTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCA 191152 ||||| | || |||| ||| | || || || |||||| | |||||||||||||| Sbjct 4202 GTAGCTTTACACGGTGCTTTTTCATTAATTGGCTTTATGTTAAGACAGTTTGAAATTGC- 4144 Query 191153 GGATTGGTGGGTA---TTA-GACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGT 191208 | | | ||| ||| | || || || ||| ||||||| || || || | || Sbjct 4143 ---TCGTTCAGTAAACTTACGTCCATATAACGCTATTGCTTTCTCAGCGCCAATTTCTGT 4087 Query 191209 TTTCACAAGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTC 191268 || ||| ||| |||| || ||| | ||||| ||||||||||||| ||| Sbjct 4086 ATTTGTTGCTGTTTTCCTAATTTACCCATTAGGTCAATCAGGTTGGTTCTTTGCTCCTAG 4027 Query 191269 ATTTGGAGTTGCAGCAATCTT 191289 ||||| || || |||||||| Sbjct 4026 CTTTGGTGTAGCTGCAATCTT 4006 >seq3723 Length=5682 Score = 123 bits (136), Expect = 3e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 182850 CAAAAGGACCTAAAACAACCACATGGATATGGAATTTACACGCAGATGCTCATGATTTTG 182909 |||||||||| || ||||| || ||||| ||||| | ||||||||||| ||||| |||| Sbjct 3239 CAAAAGGACCAAATACAACAACTTGGATTTGGAACCTTCACGCAGATGCGCATGACTTTG 3298 Query 182910 ATAAGCATTCTAGTGATCTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTTGCTC 182969 ||| ||| | |||||||| |||| | ||| |||||| | ||| ||||| |||| || Sbjct 3299 ATAGTCATACAAGTGATCTAGAAGAAATTTCTAGAAAAGTTTTTAGCGCACATTTTGGTC 3358 Query 182970 ATCTAGGTATCATCTTTGTATGG 182992 | |||||||||||||| | ||| Sbjct 3359 AATTAGGTATCATCTTTATTTGG 3381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631372818332400