Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20sphaeroides_20[genbank_20GCA_5F001662425.1_202016-
04-26] 6,890 sequences; 122,189,241 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq678 82.4 7e-11
seq589 82.4 7e-11
>seq678
Length=48865
Score = 82.4 bits (90), Expect = 7e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 39078 CAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAG 39137
||| || ||||||||| | | || || || || ||||| || || | |||| |||||
Sbjct 42531 CAAGTGCAGCGTGCTCCCGCTCTGGATGTTGTAGTCGGCCAGGGTGCAGCCGTCCTCAAG 42590
Query 39138 CTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192
||| ||||| ||||| ||||| ||||||||||||| || | | |||| |||||
Sbjct 42591 CTGCTTGCCGGCAAAGATAAGCCGCTGCTGGTCGGCCGGAATGGCCTCTCTGTCC 42645
>seq589
Length=52745
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||||| |||||||||||||| || || || || || ||||| || || || |
Sbjct 25593 GCGCAGCACCAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCC 25534
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176
||| || || || ||||| ||||| || || ||||||||||| | |||
Sbjct 25533 GTCCTCGAGTTGCTTGCCAGCAAAGATGAGCCGCTGCTGGTCCGGGGG 25486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429509530250570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |