Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq159 84.2 1e-11 >seq159 Length=2370924 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/117 (77%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 25724 CCGCGGTGTTTTG-CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG 25782 ||| | |||||| || ||| ||||| || |||||| |||||| || |||||| ||| Sbjct 477617 CCGTGTTGTTTTCTCACCTGGTCCACTCCTTTCCCCGTGTAGTCGGCGTGCATGTCTGTG 477558 Query 25783 TACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCT 25839 ||||| || || || | | ||||||||| ||||||||||| || ||| ||||||| Sbjct 477557 TACTCAGCGCCAAAGTGGCGCCACTGGAAGCCGTACACCGGGCCCAGG--TCCATCT 477503 Score = 82.4 bits (90), Expect = 5e-11 Identities = 89/117 (76%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 |||| |||| | || || || |||||||||||||||| ||||| || || | |||| | Sbjct 478424 GCCACCATGCAGGTCAGCAGCGAGTAGCTGGCGATGTTGAAGGGCACGCCCAGGCCCAGG 478365 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTG 25622 | | | ||||| |||||| | ||| ||||| ||||| |||| |||||| ||||| Sbjct 478364 T-CGCACGACCGCTGGTACATCTGGCACGACAGCTCGCCGTCCGCCACGTAGAACTG 478309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136936731680