Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq153 143 2e-29 seq150 143 2e-29 seq136 143 2e-29 seq135 143 2e-29 seq132 143 2e-29 seq131 143 2e-29 seq47 143 2e-29 seq46 143 2e-29 seq45 143 2e-29 seq44 143 2e-29 seq43 143 2e-29 seq133 104 2e-17 seq48 104 2e-17 >seq153 Length=26000 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Plus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7652 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 7711 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 7712 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 7755 Score = 134 bits (148), Expect = 9e-27 Identities = 93/104 (89%), Gaps = 6/104 (6%) Strand=Plus/Plus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| ||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 17327 GTTTATTCCAAGCCCGTTCC-TTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 17385 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 17386 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 17429 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 9625 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 9684 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 9685 GTCTGTATTTAGCCTTA 9701 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 19298 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 19357 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 19358 GTCTGTATTTAGCCTTA 19374 >seq150 Length=18504 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3581 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 3522 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 3521 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 3478 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 13211 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 13152 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 13151 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 13108 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1619 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 1560 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1559 GTCTGTATTTAGCCTTA 1543 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 11238 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 11179 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 11178 GTCTGTATTTAGCCTTA 11162 >seq136 Length=10821 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2076 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 2017 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 2016 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 1973 Score = 95.1 bits (104), Expect = 8e-15 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| || ||||||||||||||||||||| | Sbjct 119 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCG-TACTTGTTCGCTATCGGTCTCCC 61 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 60 GTCTGTATTTAGCCTTA 44 >seq135 Length=11379 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 5588 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 5529 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 5528 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 5485 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 3615 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 3556 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 3555 GTCTGTATTTAGCCTTA 3539 >seq132 Length=16748 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 10584 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 10525 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 10524 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 10481 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 8611 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 8552 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 8551 GTCTGTATTTAGCCTTA 8535 >seq131 Length=14598 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7416 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 7357 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 7356 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 7313 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 5444 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 5385 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 5384 GTCTGTATTTAGCCTTA 5368 >seq47 Length=30587 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 13593 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 13534 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 13533 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 13490 Score = 134 bits (148), Expect = 9e-27 Identities = 93/104 (89%), Gaps = 6/104 (6%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| ||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 3917 GTTTATTCCAAGCCCGTTCC-TTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 3859 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 3858 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 3815 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1946 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 1887 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1886 GTCTGTATTTAGCCTTA 1870 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 11620 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 11561 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 11560 GTCTGTATTTAGCCTTA 11544 >seq46 Length=41367 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 9446 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 9387 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 9386 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 9343 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 19121 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 19062 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 19061 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 19018 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 28793 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 28734 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 28733 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 28690 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 38468 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 38409 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 38408 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 38365 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 7473 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 7414 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 7413 GTCTGTATTTAGCCTTA 7397 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 17148 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 17089 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 17088 GTCTGTATTTAGCCTTA 17072 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 26820 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 26761 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 26760 GTCTGTATTTAGCCTTA 26744 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 36494 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 36435 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 36434 GTCTGTATTTAGCCTTA 36418 >seq45 Length=21540 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3151 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 3092 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 3091 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 3048 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 13036 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 12977 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 12976 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 12933 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 1189 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 1130 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 1129 GTCTGTATTTAGCCTTA 1113 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 11063 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 11004 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 11003 GTCTGTATTTAGCCTTA 10987 Score = 96.9 bits (106), Expect = 2e-15 Identities = 70/80 (88%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 19944 TTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 || |||||| |||||||||||||||| |||||| || ||||||||||||||||||||||| Sbjct 20730 TTACTCTCTTTTCAAAGTTCTTTTCATCTTTCC-TCGCGGTACTTGTTCGCTATCGGTCT 20672 Query 20004 CGCGGTAATATTTAGCCTTA 20023 | || |||||||||||| Sbjct 20671 CCCGTCTGTATTTAGCCTTA 20652 >seq44 Length=10074 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 4106 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 4047 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 4046 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 4003 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 2133 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 2074 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 2073 GTCTGTATTTAGCCTTA 2057 >seq43 Length=39912 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 13035 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 12976 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 12975 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 12932 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 28125 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 28066 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 28065 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 28022 Score = 143 bits (158), Expect = 2e-29 Identities = 94/104 (90%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 25893 GTTTATAATAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GG 25947 |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 37747 GTTTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGG 37688 Query 25948 TAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||||||||||| |||||||||||||||||||||||||||| Sbjct 37687 GAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 37644 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 11062 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 11003 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 11002 GTCTGTATTTAGCCTTA 10986 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 26156 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 26097 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 26096 GTCTGTATTTAGCCTTA 26080 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 35782 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 35723 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 35722 GTCTGTATTTAGCCTTA 35706 >seq133 Length=496414 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 494922 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 494863 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 494862 GTCTGTATTTAGCCTTA 494846 >seq48 Length=14181 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 14139 CTCTCTTTTCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCCC 14080 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 14079 GTCTGTATTTAGCCTTA 14063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946546852960