Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq104 104 4e-17 seq32 87.8 3e-12 >seq104 Length=3657120 Score = 104 bits (114), Expect = 4e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 242837 CCGGGGCGCCCTGATCATCCTGGAAGGCGTCGATCGTTCGGGTAAGTCGACGCAGTGTCG 242896 ||| ||||| | ||| | | || |||| || || |||| ||| |||||||| | Sbjct 641044 CCGCGGCGCGTTCATCGTGTTTGAGGGCGCGGACCGCGCGGGCAAGAGCACGCAGTGCCA 641103 Query 242897 CATGCTGGTCAAGGCCCTGCTGGAGATGGGAGTCGAGGCCGAGCTGATGAGGTTCCCGGA 242956 |||||||| || ||||| || | ||| || | ||| ||||| | | ||||| || Sbjct 641104 GATGCTGGTGGAGCACCTGCAGGCGGCGGGCGTGGCGGCAGAGCTCTGGCGCTTCCCCGA 641163 Query 242957 CAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTGCTCAACAAGAGCGATCTGGA 243016 | | ||||| | ||||| ||||||||||||| |||||| || | || || | || Sbjct 641164 CCGCACCACCGCCATCGGCAAGATGATCAACTCCTACCTGACCAGCCAGGCAGACATTGA 641223 Query 243017 CGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGATGGGA 243058 |||| | ||| ||||| || ||||| |||||||| ||||| Sbjct 641224 CGATGCGGCCGTGCACCTGCTCTTCTCCGCCAACCGCTGGGA 641265 >seq32 Length=3221238 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 42699 GAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCC 42758 ||| ||||||| |||||| | ||| ||||||||||||||||| ||| ||||| |||| Sbjct 1864688 GAGCGGCTGGTGGCCTTTGCGTGCGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCTCC 1864629 Query 42759 ATCTTCTGGCTCAAGCAG 42776 ||||||||||||||| || Sbjct 1864628 ATCTTCTGGCTCAAGAAG 1864611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337311321600