Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq112 89.7 1e-12 >seq112 Length=2452761 Score = 89.7 bits (98), Expect = 1e-12 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 ||||||| || || |||||||| || || | ||||| || || || ||||||||||| | Sbjct 1009886 CCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTGGACTCCACCTCGAGCGTGATGG 1009945 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||| || ||||| |||||||| || |||||||| Sbjct 1009946 TCTTGCCCGTCAGCGTCTTGACAAAGATCTGCAT 1009979 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 ||||||| || || |||||||| || || | ||||| || || || ||||||||||| | Sbjct 1010457 CCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTGGACTCCACCTCGAGCGTGATGG 1010516 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470 |||| || ||||| |||||||| || ||||| Sbjct 1010517 TCTTGCCCGTCAGCGTCTTGACAAAGATCTG 1010547 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 ||||||| || || |||||||| || || | ||||| || || || ||||||||||| | Sbjct 1011176 CCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTGGACTCCACCTCGAGCGTGATGG 1011235 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470 |||| || ||||| |||||||| || ||||| Sbjct 1011236 TCTTGCCCGTCAGCGTCTTGACAAAGATCTG 1011266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651981708480