Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq115 125 2e-23 >seq115 Length=3126412 Score = 125 bits (138), Expect = 2e-23 Identities = 132/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240 |||||| || || ||||| || || |||| ||||||||||| || || || || || || Sbjct 977015 GGGGAAGCCGTCCAGCTGGCCATTGGCAATGGCGCGCATCAGGGTCGACTTGCCGGCGCC 977074 Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300 ||| || || ||||| |||||||| | || |||||||| | | |||| |||||||| Sbjct 977075 GTTGGGGCCGCACAGGCCGTAGCGCTGGCCGCGCTTCAGGTGCAGGCGCGCGTTGTTCAG 977134 Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || || |||||||| ||||| || || || || | ||||| |||||||| Sbjct 977135 CAGGATCTTGCCACCATAGGCCAGGGAGAACTCGCAGTTGCACAGGTCCTCACC 977188 Score = 118 bits (130), Expect = 2e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 333305 GTCAAGGGTCTCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGT 333364 ||| |||| ||| ||| || |||| ||| |||||||| ||||| ||||||||||| || Sbjct 975088 GTCCAGGGACTCGCGGTCCTCGCCGGTGGCGTAACGCCACTGGATGTACTGGTTGGGGGT 975147 Query 333365 CATGTCAAGATGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCAT 333424 |||||| || || | ||| ||||||||||| || ||||| |||||||| || | |||| Sbjct 975148 CATGTCCAGGTGGTTCTCAATGTGGTGGAACGCGTGCTGCGCCACGTACGCGACGCGCAG 975207 Query 333425 ATTTGGATGCTTCCAAAC 333442 || || |||||||| || Sbjct 975208 GTTGGGGTGCTTCCACAC 975225 Score = 93.3 bits (102), Expect = 9e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 334725 TTCGCCATGTTCCGGATGATAACACACGTCTTACGCCGAACGGGGGTGGTGCGATCGGCA 334784 || |||||||| |||||||| || || | |||||| || | |||||||||||| |||| Sbjct 978296 TTGGCCATGTTGCGGATGATCACGCAGGCCTTACGGCGGATGGGGGTGGTGCGGTCGGTC 978355 Query 334785 AGCCCGCGGACGAGTAGCGGGGTCAGGATAGACAGGGTCTTCGCGTCGACCGACTG 334840 || ||||| || || || || |||||| |||||||| ||| || |||||||| Sbjct 978356 AGACCGCGCACCAGCAGGGGCACCAGGATGGACAGGGTGCGCGCATCCACCGACTG 978411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877739096000