Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq35 109 1e-18 seq138 95.1 3e-14 seq112 91.5 3e-13 >seq35 Length=2876677 Score = 109 bits (120), Expect = 1e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || ||||||||||| |||| |||||||||||||| || Sbjct 2472710 CGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCCAGCGTG 2472651 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || ||||||||||| ||||||||||| || ||||||||||| || Sbjct 2472650 CGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 2472601 >seq138 Length=2592956 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || || |||||||| || | ||| || || ||||| ||| Sbjct 406351 CGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGAATGTTATAATCGGCCAAGGTC 406292 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || ||||||||||| || ||||||||||| ||||||||||| || Sbjct 406291 CGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGG 406242 >seq112 Length=2452761 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || || |||||||| |||| ||| ||||| || | || Sbjct 1009586 CGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCGAGCGTA 1009645 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || ||||||||||| || ||||||||||| ||||||||||| || Sbjct 1009646 CGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGG 1009695 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || || |||||||| |||| ||| ||||| || | || Sbjct 1012256 CGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTA 1012315 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | || || ||||||||||| || ||||||||||| ||||||||||| || Sbjct 1012316 CGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGG 1012365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919183210720