Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq35 102 8e-17 seq117 89.7 5e-13 seq32 86.0 6e-12 >seq35 Length=2876677 Score = 102 bits (112), Expect = 8e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 38346 GGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGC 38405 || || ||| | ||||| ||||| || || | ||| ||||| |||||||| |||| ||| Sbjct 2472592 GGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGC 2472651 Query 38406 ACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGA 38465 || || |||||||||||||| ||||| |||||||||| |||||||||| || | Sbjct 2472652 ACGCTGGCTGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGC 2472711 Query 38466 GGCGGC 38471 |||||| Sbjct 2472712 GGCGGC 2472717 >seq117 Length=2441637 Score = 89.7 bits (98), Expect = 5e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || || ||||||| ||||| ||||| | |||||||| |||||||| Sbjct 1798936 GACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTCATCTTTGCGGGCAAGCAGCTGGAG 1798877 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 |||| ||||| || ||||||||||||||| |||| Sbjct 1798876 GACGGCCGCACGCTGGCCGACTACAACATCCAGAAGG 1798840 >seq32 Length=3221238 Score = 86.0 bits (94), Expect = 6e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 ||||||||||||||||| || |||||||| || |||| | ||| ||| || |||||| Sbjct 1864594 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAG 1864653 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTC 133049 | |||||| ||| ||| || |||||||| ||||| Sbjct 1864654 ATGCCCTCCACGCACGCAAAGGCCACCAGCCGCTC 1864688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171799654400