Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq148 722 0.0 >seq148 Length=122497 Score = 722 bits (800), Expect = 0.0 Identities = 758/994 (76%), Gaps = 2/994 (0%) Strand=Plus/Minus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 |||||||||||||| ||| ||||| || ||| | ||| | |||||||||||||| | Sbjct 78886 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 78827 Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCT 215413 ||||| ||| || | | || || || |||||| | || || ||||| || ||| Sbjct 78826 ATGATCCCTACTCTTTTAACTGCAACTTCTGTTTTCATTATCGCGTTTATCGCGGCTCCT 78767 Query 215414 CCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAAC 215473 ||||| |||||||| || ||| | ||||| || ||||||| ||| | || || |||||| Sbjct 78766 CCTGTTGATATCGATGGTATCCGTGAGCCTGTATCTGGTTCATTATTATACGGAAACAAC 78707 Query 215474 ATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATC 215533 |||||| ||||||| || | |||| || ||||| ||||| |||||||||||||| || Sbjct 78706 ATCATCACTGGTGCAATTATTCCTACATCTAACGCTATCGGTTTACACTTCTACCCAATT 78647 Query 215534 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATC 215593 |||||||| ||| | | || || ||| | ||||| ||||| |||| |||||| | | Sbjct 78646 TGGGAAGCTGCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAACTTATCGTT 78587 Query 215594 TTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGA 215653 | |||||| || | ||| | | | | ||| || | | |||||| | |||| | | Sbjct 78586 TGTCACTTCTTCTTAGGTGTATGTTCTTACATGGGTCGTGAATGGGAATTATCTTTCCGT 78527 Query 215654 TTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCA 215713 ||||||||| | || |||||| ||||||||||| ||||| || |||| || || Sbjct 78526 TTAGGTATGCGTCCATGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGCT 78467 Query 215714 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATC 215773 |||||| || | || ||| ||||||| |||||||||||||| | |||||| | || ||| Sbjct 78466 GTATTCATTATCTACCCACTCGGTCAAGGTTCTTTCTCTGACGGTATGCCTTTAGGTATC 78407 Query 215774 TCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCA 215833 || || || ||||||| |||| | || ||||| ||||||||||||||||| ||||||||| Sbjct 78406 TCAGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATTCTTATGCACCCA 78347 Query 215834 TTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGT 215893 ||||||||| | ||||| |||||||| || ||||||||||| |||||||||||||||||| Sbjct 78346 TTCCACATGCTTGGTGTAGCTGGTGTATTTGGTGGTTCATTATTCTCTGCAATGCACGGT 78287 Query 215894 TCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGT 215953 |||||||| || |||||| |||| | || || ||||| | ||||| ||| | ||| Sbjct 78286 TCACTTGTAACTTCTTCTTTAATTCGTGAAACTACTGAAAACGAATCAGCTAACGAAGGT 78227 Query 215954 TACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGT 216013 ||||| ||||| ||||| || ||||| ||||||||||| || || || || ||||| ||| Sbjct 78226 TACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGGT 78167 Query 216014 CGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCA 216073 || | || |||||||| || || ||||||||||| | | ||||||||| | || Sbjct 78166 CGTTTAATTTTCCAATATGCTTCATTCAACAACTCTCGTTCATTACACTTCTTCTTAGCT 78107 Query 216074 GCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAAC 216133 || | || ||| || |||| ||| ||||| | ||| | ||||||||||| |||||| Sbjct 78106 GCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAAC 78047 Query 216134 CTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACT 216193 | || ||||||||||||||||| || || ||||| || ||| || || ||| Sbjct 78046 TTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACACT 77987 Query 216194 TGGGCAGACGTTCTTAACAGAGCAGGACTT-GGTATGGAAGTAATGCACGAGCGTAACGC 216252 ||||||||| || | ||| | || |||| ||||||||||||||||||||||||||||| Sbjct 77986 TGGGCAGACATTATCAACCGTGCTA-ACTTAGGTATGGAAGTAATGCACGAGCGTAACGC 77928 Query 216253 TCACAACTTCCCATTAGACTTGGCTGCTGCTGAA 216286 |||||||||||||||||| || |||| || |||| Sbjct 77927 TCACAACTTCCCATTAGATTTAGCTGTTGTTGAA 77894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745080109836800