Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq148 468 2e-127 >seq148 Length=122497 Score = 468 bits (518), Expect = 2e-127 Identities = 698/985 (71%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 |||||||||||||| || || ||||| |||||| | || | || ||||| || || | Sbjct 78886 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 78827 Query 25862 ATGATACCCTGCT-TACTCGCAGCCACTACATGTTTT-ATACTTGCCTTCATCGCAGCAC 25919 ||||| |||| || | | | || ||| | |||||| || | || || ||||| || | Sbjct 78826 ATGAT-CCCTACTCTTTTAACTGCAACTTC-TGTTTTCATTATCGCGTTTATCGCGGCTC 78769 Query 25920 CGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACA 25979 | ||||| ||||| ||||| || |||||||| || || || || ||| | |||||||||| Sbjct 78768 CTCCTGTTGATATCGATGGTATCCGTGAGCCTGTATCTGGTTCATTATTATACGGAAACA 78709 Query 25980 ATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGA 26039 | || || | || ||| | | || | |||||||| ||||| |||| || ||||| | Sbjct 78708 ACATCATCACTGGTGCAATTATTCCTACATCTAACGCTATCGGTTTACACTTCTACCCAA 78649 Query 26040 TCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 | |||||||||| | | || |||||| ||||||| || || || || ||||| || Sbjct 78648 TTTGGGAAGCTGCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAACTTATCG 78589 Query 26100 TCTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACA 26159 | | |||||||| |||| ||| | || || | | |||||| |||||| | Sbjct 78588 TTTGTCACTTCTTCTTAGGTGTATGTTCTTACATGGGTCGTGAATGGGAATTATCTTTCC 78529 Query 26160 GACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCG 26219 | |||| ||| | |||||||| ||||| || |||||||| | | |||||| | Sbjct 78528 GTTTAGGTATGCGTCCATGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAG 78469 Query 26220 CAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTA 26279 | || ||| | | || || |||| ||||| ||| ||| || |||||| | |||| Sbjct 78468 CTGTATTCATTATCTACCCACTCGGTCAAGGTTCTTTCTCTGACGGTATGCCTTTAGGTA 78409 Query 26280 TCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACC 26339 |||| |||||||| ||||| ||| ||||||||||||| || || || || || ||||||| Sbjct 78408 TCTCAGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATTCTTATGCACC 78349 Query 26340 CATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACG 26399 ||||||| ||| |||||| ||||| || || ||||| | | ||| |||| ||||||| Sbjct 78348 CATTCCACATGCTTGGTGTAGCTGGTGTATTTGGTGGTTCATTATTCTCTGCAATGCACG 78289 Query 26400 GAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATG 26459 | | || ||||| || | ||| ||||| || || | | ||| || | | Sbjct 78288 GTTCACTTGTAACTTCTTCTTTAATTCGTGAAACTACTGAAAACGAATCAGCTAACGAAG 78229 Query 26460 GCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTG 26519 | || || || || ||||| ||||| || || || || || || || || || ||||| | Sbjct 78228 GTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCG 78169 Query 26520 GGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTG 26579 | | |||||||| || ||||| || || ||| ||||| | || ||||| | | Sbjct 78168 GTCGTTTAATTTTCCAATATGCTTCATTCAACAACTCTCGTTCATTACACTTCTTCTTAG 78109 Query 26580 CTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTA 26639 || ||||||| |||||||| || ||| | || || | ||||| | || |||||||| | Sbjct 78108 CTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCA 78049 Query 26640 ACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTA 26699 || |||||||||| ||||| ||||| ||||| |||||| | || |||| | Sbjct 78048 ACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACA 77989 Query 26700 CATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATG 26759 | ||||| || | | ||||| |||||| | || | ||||| |||||||||||||| | Sbjct 77988 CTTGGGCAGACATTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAGCGTAACG 77929 Query 26760 CTCATAACTTTCCACTTGACTTAGC 26784 |||| ||||| ||| | || ||||| Sbjct 77928 CTCACAACTTCCCATTAGATTTAGC 77904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146726121219840