Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq148 627 3e-175 >seq148 Length=122497 Score = 627 bits (694), Expect = 3e-175 Identities = 738/997 (74%), Gaps = 6/997 (1%) Strand=Plus/Plus Query 35964 TCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 36023 ||| || | |||| || | |||||||||||| ||||||||||| ||||| |||||||| Sbjct 77895 TCAACAACAGCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 77954 Query 36024 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 36083 ||||||| |||||||| | |||||| |||||||| || || | || | ||||| Sbjct 77955 CCTAAGTTAGCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCT 78014 Query 36084 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 36143 || ||||| || |||||||| || || || | || || |||||||| || | || | | Sbjct 78015 ACAACTGATTGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAA 78074 Query 36144 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTA 36203 || || | ||| || | | || ||||||||||| | |||||| ||||| || Sbjct 78075 GCAGTGAACCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAG 78134 Query 36204 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 36263 || || || |||||| ||||| || | | || |||||||||||||| ||||| ||| Sbjct 78135 TTGTTGAATGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATG 78194 Query 36264 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 36323 || || || ||||||||||| |||||||| || || | ||| ||||| |||| Sbjct 78195 TTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTA 78254 Query 36324 GTTTCACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCA 36383 ||||||||||| | || ||||| ||||| |||||||| |||| |||||| | ||| Sbjct 78255 GTTTCACGAATTAAAGAAGAAGTTACAAGTGAACCGTGCATTGCAGAGAATAATGAACCA 78314 Query 36384 CCGAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCC 36443 || ||||| || || ||||| ||||| ||||| || |||||||| || ||||| || || Sbjct 78315 CCAAATACACCAGCTACACCAAGCATGTGGAATGGGTGCATAAGAATGTTGTGCTCAGCT 78374 Query 36444 TGAAAGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAA 36503 || || || | ||| || |||||||| ||||| ||||| | ||||||||| ||||||||| Sbjct 78375 TGGAATACGATCATGAAGTTGAAAGTACCTGAGATACCTAAAGGCATACCGTCAGAGAAA 78434 Query 36504 CTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAA 36563 ||||| || | ||||||| | ||||||||| ||||| ||||| || ||||| Sbjct 78435 GAACCTTGACCGAGTGGGTAGATAATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAG 78494 Query 36564 TAAGCTACACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 36623 ||||| || ||||| || | |||||||| | || | |||||||| || ||| Sbjct 78495 TAAGCAACTGCGATCCATGGACGCATACCTAAACGGAAAGATAATTCCCATTCACGACCC 78554 Query 36624 AAGTAAGCTGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTA 36683 | ||||| | | ||| | || ||||| | || || ||||| || || || ||||| Sbjct 78555 ATGTAAGAACATACACCTAAGAAGAAGTGACAAACGATAAGTTGGTAAGGACCACCGTTG 78614 Query 36684 TATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 36743 ||||||||||| || | | |||||||||||| |||||||||||||| | |||||| ||| Sbjct 78615 TATAACCACTCATCTAAAGATGCAGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCG 78674 Query 36744 TTCGATGATGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAG 36803 || |||| || | ||||| |||| ||||||||||||||| || | ||||| || || Sbjct 78675 TTAGATGTAGGAATAATTGCACCAGTGATGATGTTGTTTCCGTATAATAATGAACCAGAT 78734 Query 36804 ACAGGCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGC---AATTAAA 36860 ||||||||||| |||||||| ||||| || ||||| || || | ||| || ||| ||| Sbjct 78735 ACAGGCTCACGGATACCATCGATATCAACAGGAGGAGCCGCGATAAACGCGATAATGAAA 78794 Query 36861 AATGCTGTCACTGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAG 36920 | | || ||| |||||||| | ||||||||||| ||| |||||||| || | || Sbjct 78795 ACAGAAGT---TGCAGTTAAAAGAGTAGGGATCATTAATACACCAAACCAACCGATGTAT 78851 Query 36921 AGGCGGTTGTTTGTACTTGTAACCCAGTCACATAAAC 36957 | ||||| | || || || ||||| ||||| |||| Sbjct 78852 AAACGGTTTTCAGTGCTAGTTACCCACTCACAAAAAC 78888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150454114136640