Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq104 120 6e-22 >seq104 Length=3657120 Score = 120 bits (132), Expect = 6e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 38966 CTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGTCTTACT 39025 |||||| | ||||||||||||||||||||| || || ||||| | || | || || Sbjct 641266 CTCCCAGCGGTTGGCGGAGAAGAGCAGGTGCACGGCCGCATCGTCAATGTCTGCCTGGCT 641207 Query 39026 CTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGTTCTGTCGGGGAACCTCATCAG 39085 |||||| ||| |||||||||| ||||||| ||||| | ||||||||| | | || Sbjct 641206 GGTCAGGTAGGAGTTGATCATCTTGCCGATGGCGGTGGTGCGGTCGGGGAAGCGCCAGAG 641147 Query 39086 CTCGGCCG-GTCTCCCGCTACCTTGCAGAGCCTCCACCAGCTTTTGACACTGTGTGGTCT 39144 ||| |||| | ||||| || ||||| |||||||||| | || ||||| ||| ||| Sbjct 641146 CTCTGCCGCCACGCCCGCCGCC-TGCAGGTGCTCCACCAGCATCTGGCACTGCGTGCTCT 641088 Query 39145 TTCCAGCCCTGTCCACTCCTTCCAATAC 39172 | || || | |||| | || || || || Sbjct 641087 TGCCCGCGCGGTCCGCGCCCTCAAACAC 641060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530936934400