Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq148 585 8e-163 >seq148 Length=122497 Score = 585 bits (648), Expect = 8e-163 Identities = 719/975 (74%), Gaps = 8/975 (1%) Strand=Plus/Plus Query 21483 GGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAGA 21542 ||||||||||| ||||| ||||| ||||| || || | || | ||| |||||||| | | Sbjct 77916 GGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAAGTTAGCACGGTTGATA 77975 Query 21543 ATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGGTTAAAGTTG 21602 ||||| ||||| |||||||| || | || | | | ||| | |||||||| |||||| Sbjct 77976 ATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTTGAAGTTG 78035 Query 21603 AAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTACA 21662 |||||||| |||||||| ||||| || || | || | |||| ||||||||||| ||| Sbjct 78036 AAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAACCAAATACCAACA 78095 Query 21663 ACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGG 21722 || ||||| ||||| | ||||| || | ||| || || || || |||||||||| Sbjct 78096 ACTGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGTTGAATGAAGCATATTGG 78155 Query 21723 AAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGA 21782 || || | ||||| || ||||| ||||| ||||| || |||||||| ||||| |||||| Sbjct 78156 AAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGA 78215 Query 21783 CCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGAATGAGTGACGAC 21842 || || |||||||| | ||| ||| | | |||||| || |||||||| | || || Sbjct 78216 CCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTAGTTTCACGAATTAAAGAAGAA 78275 Query 21843 GTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACGCCGGCCACACCC 21902 || || || ||||||||| |||||||| || ||||||||||| || || ||||| Sbjct 78276 GTTACAAGTGAACCGTGCATTGCAGAGAATAATGAACCACCAAATACACCAGCTACACCA 78335 Query 21903 AGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCATGTAGTTG 21962 |||||||| || || ||||||||||| ||||||||||| ||||| || | |||| ||||| Sbjct 78336 AGCATGTGGAATGGGTGCATAAGAATGTTGTGCTCAGCTTGGAATACGATCATGAAGTTG 78395 Query 21963 AAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAACGGATAA 22022 || || || || || || || |||||| | ||||| ||||| || || || | || || Sbjct 78396 AAAGTACCTGAGATACCTAAAGGCATACCGTCAGAGAAAGAACCTTGACCGAGTGGGTAG 78455 Query 22023 ACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATCCAGGGC 22082 | || ||| ||||| || || || || || || || ||||| ||||| |||||| || Sbjct 78456 ATAATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAGTAAGCAACTGCGATCCATGGA 78515 Query 22083 CTCATCCCTAGTC-GATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAAT 22141 | ||| |||| | || || ||| |||||| || || |||||||||| | | || || | Sbjct 78516 CGCATACCTAAACGGAAAGATAA-TTCCCATTCACGACCCATGTAAGAACATACACCTAA 78574 Query 22142 GAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCAAGTGT 22201 || |||||| | ||| | |||||| | ||||| |||||||| | ||| ||||| | | Sbjct 78575 GAAGAAGTGACAAACGATAAGTTGGTAAGGACCACCGTTGTATAACCACTCATCTAAAGA 78634 Query 22202 AGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAACGACGGC 22261 |||||||||||||||||||||||||||| ||||| || ||| | |||| | || Sbjct 78635 TGCAGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCGTTAGATGTAGGAATAATTGC 78694 Query 22262 TCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATC 22321 || | ||||||||||| || || || | || |||| || || || ||||| ||||| Sbjct 78695 ACCAGTGATGATGTTGTTTCCGTATAATAATGAACCAGATACAGGCTCACGGATACCATC 78754 Query 22322 GATGTCAACAGGTGGTGCGCCAACAAAGGCGATAAT-AAAAC--AAGTTGTAGCGGCAAG 22378 ||| |||||||| || || | | ||| |||||||| ||||| |||||| || || Sbjct 78755 GATATCAACAGGAGGAGCCGCGATAAACGCGATAATGAAAACAGAAGTTGCAG-TTAAAA 78813 Query 22379 GAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATTAGTAGAGGT 22438 ||| || ||||| | || || ||||| || | || | |||||| | ||| || Sbjct 78814 GAG--TAGGGATCATTAATACACCAAACCAACCGATGTATAAACGGTTTTCAGTGCTAGT 78871 Query 22439 GACCCAGGAACAAAA 22453 ||||| |||||| Sbjct 78872 TACCCACTCACAAAA 78886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146207722204800