Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq148 628 3e-175 >seq148 Length=122497 Score = 628 bits (696), Expect = 3e-175 Identities = 729/983 (74%), Gaps = 0/983 (0%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 ||||| ||||||||||||||||| || || | || ||||| ||||||||||||||||| Sbjct 77904 GCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAAGTTA 77963 Query 7951 GCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGAT 8010 || | ||| | | ||| |||| || || | ||| | ||| ||||||||| Sbjct 77964 GCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGAT 78023 Query 8011 TGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAAC 8070 ||||| ||||| || || || | ||| |||||||| || ||||||| | || ||| ||| Sbjct 78024 TGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAAC 78083 Query 8071 CAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGTTAAAC 8130 |||| || |||||||| | | ||| | ||||||||| | | | |||||| || Sbjct 78084 CAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGTTGAAT 78143 Query 8131 GATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATAGGTC 8190 || ||||| ||||| ||||| | ||| ||||| |||||||| ||||| || || || || Sbjct 78144 GAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTT 78203 Query 8191 TCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTCTCTG 8250 |||||||||||||| || || ||||| | ||| || || | |||||| || || | Sbjct 78204 TCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTAGTTTCACGA 78263 Query 8251 ATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAACATA 8310 |||| |||||| || || | ||||||||||| ||| ||| | ||| ||||| || | | Sbjct 78264 ATTAAAGAAGAAGTTACAAGTGAACCGTGCATTGCAGAGAATAATGAACCACCAAATACA 78323 Query 8311 CCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAATACG 8370 || ||||| || ||| ||||| || |||||||||||||| ||||| |||||||||||| Sbjct 78324 CCAGCTACACCAAGCATGTGGAATGGGTGCATAAGAATGTTGTGCTCAGCTTGGAATACG 78383 Query 8371 AACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACCCTGA 8430 | ||||||||| || ||||| || ||||||| |||||| || |||||||| ||||| ||| Sbjct 78384 ATCATGAAGTTGAAAGTACCTGAGATACCTAAAGGCATACCGTCAGAGAAAGAACCTTGA 78443 Query 8431 CCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATGCTACA 8490 || | ||| || | | ||| || || ||| |||| ||||| || || || || Sbjct 78444 CCGAGTGGGTAGATAATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAGTAAGCAACT 78503 Query 8491 CAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGTAAGCA 8550 ||||||||| | ||||||||| ||| | ||||| ||||| | | ||||||||||| | Sbjct 78504 GCGATCCATGGACGCATACCTAAACGGAAAGATAATTCCCATTCACGACCCATGTAAGAA 78563 Query 8551 GAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACAACCAC 8610 | | || | | |||||| | | | | || || ||||| ||||| || |||||| Sbjct 78564 CATACACCTAAGAAGAAGTGACAAACGATAAGTTGGTAAGGACCACCGTTGTATAACCAC 78623 Query 8611 TCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGAT 8670 |||||||| | |||||||||||||| || ||||||||||| || |||||||| || | Sbjct 78624 TCATCTAAAGATGCAGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCGTTAGATGTA 78683 Query 8671 GGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCA 8730 |||| | ||||||| ||||||||||||||| || | |||||||| | ||||| ||| Sbjct 78684 GGAATAATTGCACCAGTGATGATGTTGTTTCCGTATAATAATGAACCAGATACAGGCTCA 78743 Query 8731 CGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCA 8790 || ||||| |||||||| ||||| ||||| || ||||| || | || || || || Sbjct 78744 CGGATACCATCGATATCAACAGGAGGAGCCGCGATAAACGCGATAATGAAAACAGAAGTT 78803 Query 8791 GCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTTT 8850 |||| ||| | ||| ||||||| || ||||||||||||| || | | ||| | Sbjct 78804 GCAGTTAAAAGAGTAGGGATCATTAATACACCAAACCAACCGATGTATAAACGGTTTTCA 78863 Query 8851 GTACTTGTAACCCACTCGCAAAA 8873 || || || |||||||| ||||| Sbjct 78864 GTGCTAGTTACCCACTCACAAAA 78886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615861168275200