Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq35 89.7 7e-13 seq112 84.2 3e-11 >seq35 Length=2876677 Score = 89.7 bits (98), Expect = 7e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || |||||||||||||| ||||| || Sbjct 2472143 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCG 2472202 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| || || || | || |||||||| || || ||||| || Sbjct 2472203 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGG 2472246 >seq112 Length=2452761 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 |||||| || ||||| ||||| || || || || || || || ||||| || || || || Sbjct 1012375 AGGCATCCCCCCCGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGCCG 1012316 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||||||| || || ||| | || |||||||| || || ||||| || || Sbjct 1012315 TACCCTCGCCGACTATAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCT 1012265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861084275200