Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq148 468 2e-127 >seq148 Length=122497 Score = 468 bits (518), Expect = 2e-127 Identities = 698/985 (71%), Gaps = 4/985 (0%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 ||||| || | ||| ||||| ||||| |||||||||||||| ||||| | || | |||| Sbjct 77904 GCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAAGTTA 77963 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 || ||||| | | || ||||| || |||| || | |||||| ||||| Sbjct 77964 GCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGAT 78023 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 ||||| ||||| |||||||||| ||| |||||||| || | ||||| | || || | | Sbjct 78024 TGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAAGCAGTGAAC 78083 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || |||||||| ||||||| ||| | ||||| || | ||||| ||| || || Sbjct 78084 CAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAGTTGTTGAAT 78143 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 ||||| || |||||||| | || ||||| || || || || || || || || || Sbjct 78144 GAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATGTTGTAAGTT 78203 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 ||||| ||||| || || || || || | || ||| | | || || ||||| | Sbjct 78204 TCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTAGTTTCACGA 78263 Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296 || | || ||||| || | |||||||| |||| ||| | | ||||| || || Sbjct 78264 ATTAAAGAAGAAGTTACAAGTGAACCGTGCATTGCAGAGAATAATGAACCACCAAATACA 78323 Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356 ||||| |||||| ||| |||||||||||||| || || || || || |||||||||||| Sbjct 78324 CCAGCTACACCAAGCATGTGGAATGGGTGCATAAGAATGTTGTGCTCAGCTTGGAATACG 78383 Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416 | ||| ||||| |||||||| |||||||| | |||||| || ||| ||| ||||| Sbjct 78384 ATCATGAAGTTGAAAGTACCTGAGATACCTAAAGGCATACCGTCAGAGAAAGAACCTTGA 78443 Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476 |||| || || | | ||| || || |||||| | | |||||||| || ||||| Sbjct 78444 CCGAGTGGGTAGATAATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAGTAAGCAACT 78503 Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCT 26536 |||||||| | ||| |||| | | |||||| |||||| | | || || | Sbjct 78504 GCGATCCATGGACGCATACCTAAACGGAAAGATAATTCCCATTCACGACCCATGTAAGAA 78563 Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596 ||| |||| |||||||| | | || ||||| || || || || ||||||| |||| Sbjct 78564 CATACACCTAAGAAGAAGTGACAAACGATAAGTTGGTAAGGACCACCGTTGTATAACCAC 78623 Query 26597 TCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAG 26656 || || | | |||||||||| || ||||| || |||| ||||| |||||||| | Sbjct 78624 TCATCTAAAGATGCAGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCGTTAGATGTA 78683 Query 26657 GGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCA 26716 || | | ||| || | || || ||||||||||| | ||| || || || || |||||| Sbjct 78684 GGAATAATTGCACCAGTGATGATGTTGTTTCCGTATAATAATGAACCAGATACAGGCTCA 78743 Query 26717 CGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTAT-AAAACATGTAGT 26775 || || ||||| ||||| ||||| || || ||||| || || | || |||||| | ||| Sbjct 78744 CGGATACCATCGATATCAACAGGAGGAGCCGCGATAAACGCGATAATGAAAACA-GAAGT 78802 Query 26776 GGCTGCGAGTA-AGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCT 26834 || | | | || |||| ||||| | || || ||||| || | || | |||||| | Sbjct 78803 TGCAGTTAAAAGAGTAGGG-ATCATTAATACACCAAACCAACCGATGTATAAACGGTTTT 78861 Query 26835 CAGTACTTGTAACCCACTCACAAAA 26859 |||| || || |||||||||||||| Sbjct 78862 CAGTGCTAGTTACCCACTCACAAAA 78886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147711719347200