Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq148 740 0.0 >seq148 Length=122497 Score = 740 bits (820), Expect = 0.0 Identities = 755/985 (77%), Gaps = 0/985 (0%) Strand=Plus/Minus Query 154976 AGTGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCC 155035 ||||||||||| |||| ||||| | || |||||||||| ||||| | ||||||| Sbjct 78879 AGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTAATGATCC 78820 Query 155036 CTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAG 155095 || || | |||| || | |||||| |||| || || || || |||||||| | Sbjct 78819 CTACTCTTTTAACTGCAACTTCTGTTTTCATTATCGCGTTTATCGCGGCTCCTCCTGTTG 78760 Query 155096 ACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCT 155155 | || |||||||| ||||| || || ||||||| ||| | || || |||||||||||| Sbjct 78759 ATATCGATGGTATCCGTGAGCCTGTATCTGGTTCATTATTATACGGAAACAACATCATCA 78700 Query 155156 CTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAG 155215 ||||||| || | |||| || ||||| || ||| | |||||||| || |||||||||| Sbjct 78699 CTGGTGCAATTATTCCTACATCTAACGCTATCGGTTTACACTTCTACCCAATTTGGGAAG 78640 Query 155216 CAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACT 155275 | ||| || | ||||||||||| ||||| |||||||||| ||||||| | || | |||| Sbjct 78639 CTGCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAACTTATCGTTTGTCACT 78580 Query 155276 TCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCA 155335 || | | || | | ||| |||||| | |||||| | |||| |||| | || | Sbjct 78579 TCTTCTTAGGTGTATGTTCTTACATGGGTCGTGAATGGGAATTATCTTTCCGTTTAGGTA 78520 Query 155336 TGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCC 155395 ||||||| |||||| ||||| ||||| |||||||| |||| || ||||||||| Sbjct 78519 TGCGTCCATGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGCTGTATTCA 78460 Query 155396 TTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTA 155455 || | || || |||||||||||||||||||||| | |||||| | |||||||| |||| Sbjct 78459 TTATCTACCCACTCGGTCAAGGTTCTTTCTCTGACGGTATGCCTTTAGGTATCTCAGGTA 78400 Query 155456 CTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACA 155515 |||| |||| ||| |||| |||||||| || ||||| || ||||||||||| ||||||| Sbjct 78399 CTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATTCTTATGCACCCATTCCACA 78340 Query 155516 TGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGG 155575 ||||||| ||||| ||||| || ||||| || | |||||||| |||||||||||| | | Sbjct 78339 TGCTTGGTGTAGCTGGTGTATTTGGTGGTTCATTATTCTCTGCAATGCACGGTTCACTTG 78280 Query 155576 TGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGT 155635 | || ||||| |||| |||||||||||||| | || || ||| | |||||||| | Sbjct 78279 TAACTTCTTCTTTAATTCGTGAAACTACTGAAAACGAATCAGCTAACGAAGGTTACAAAT 78220 Query 155636 TCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTA 155695 |||| ||||||||||||||||| ||||| ||||| |||||||| |||||||||||| | | Sbjct 78219 TCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGGTCGTTTAA 78160 Query 155696 TCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGC 155755 | ||||| ||||| || ||||||||||| | | ||||||||| | ||||| |||| Sbjct 78159 TTTTCCAATATGCTTCATTCAACAACTCTCGTTCATTACACTTCTTCTTAGCTGCTTGGC 78100 Query 155756 CTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACG 155815 | || || | || ||| |||||| | ||| | ||||| |||||||||||| | || | Sbjct 78099 CAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAACTTAAATG 78040 Query 155816 GTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGTGGTAAAGTCATCCCTACATGGGCAG 155875 |||||||||||||||| || || ||||| | ||| || ||| || ||||||| Sbjct 78039 GTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACACTTGGGCAG 77980 Query 155876 ACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 155935 ||||| | ||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct 77979 ACATTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 77920 Query 155936 TCCCTCTTGACCTTGCTGCTGCTGA 155960 |||| | || | |||| || ||| Sbjct 77919 TCCCATTAGATTTAGCTGTTGTTGA 77895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584834030329600