Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq148 645 0.0 >seq148 Length=122497 Score = 645 bits (714), Expect = 0.0 Identities = 738/992 (74%), Gaps = 0/992 (0%) Strand=Plus/Plus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| || |||||| |||| || |||||||||||||||||||||||||||||||||||| Sbjct 77895 TCAACAACAGCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 77954 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 |||| | | ||| | || || |||||||| || || ||| | | ||| Sbjct 77955 CCTAAGTTAGCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATCT 78014 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 || ||||| ||||| ||||| |||||||| | ||| || |||||||| || ||||| | Sbjct 78015 ACAACTGATTGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAAA 78074 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTA 40763 | || | ||| || |||| ||| || ||||| | | |||||||||| | ||| Sbjct 78075 GCAGTGAACCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGAG 78134 Query 40764 TTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATG 40823 |||||||||||||||||||| || |||| | ||| ||||| || || || || |||||| Sbjct 78135 TTGTTGAATGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGATG 78194 Query 40824 TTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTG 40883 || ||||| || |||| ||||| || || || || | ||| |||||| |||| || Sbjct 78195 TTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGTA 78254 Query 40884 GTCTCCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCA 40943 || || ||||| | || ||||| ||||| |||||||| |||| || || | |||| Sbjct 78255 GTTTCACGAATTAAAGAAGAAGTTACAAGTGAACCGTGCATTGCAGAGAATAATGAACCA 78314 Query 40944 CCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCT 41003 ||||| || || || || || ||||| |||||||||||||| ||||||||||| || ||| Sbjct 78315 CCAAATACACCAGCTACACCAAGCATGTGGAATGGGTGCATAAGAATGTTGTGCTCAGCT 78374 Query 41004 TGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAA 41063 ||||| || | |||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct 78375 TGGAATACGATCATGAAGTTGAAAGTACCTGAGATACCTAAAGGCATACCGTCAGAGAAA 78434 Query 41064 GAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTG 41123 ||||| ||||||| ||| || | | |||||||||| |||||| | | ||| |||| | Sbjct 78435 GAACCTTGACCGAGTGGGTAGATAATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGAG 78494 Query 41124 TATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCA 41183 || || || |||||||| | |||||||| | | | || | |||||| | | ||| Sbjct 78495 TAAGCAACTGCGATCCATGGACGCATACCTAAACGGAAAGATAATTCCCATTCACGACCC 78554 Query 41184 GCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTG 41243 ||| | ||| |||| || |||||| | || || ||||| || || || |||||| Sbjct 78555 ATGTAAGAACATACACCTAAGAAGAAGTGACAAACGATAAGTTGGTAAGGACCACCGTTG 78614 Query 41244 TATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCG 41303 |||| |||||| || | | | |||||||| ||||||||||| |||| ||||| ||| Sbjct 78615 TATAACCACTCATCTAAAGATGCAGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGCG 78674 Query 41304 TTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAA 41363 ||||| | |||| | || |||| || || ||||| ||||| | ||| || || || Sbjct 78675 TTAGATGTAGGAATAATTGCACCAGTGATGATGTTGTTTCCGTATAATAATGAACCAGAT 78734 Query 41364 ACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAAA 41423 || |||||||| || ||||| ||||| ||||| || || |||||||| ||||| |||||| Sbjct 78735 ACAGGCTCACGGATACCATCGATATCAACAGGAGGAGCCGCGATAAACGCGATAATGAAA 78794 Query 41424 CATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGG 41483 | || ||||||| | | || ||||||| |||||||||||||| | ||||| Sbjct 78795 ACAGAAGTTGCAGTTAAAAGAGTAGGGATCATTAATACACCAAACCAACCGATGTATAAA 78854 Query 41484 CGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 ||||| || |||||||| ||||| | |||||| Sbjct 78855 CGGTTTTCAGTGCTAGTTACCCACTCACAAAA 78886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143702126965440