Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq148 713 0.0 >seq148 Length=122497 Score = 713 bits (790), Expect = 0.0 Identities = 734/954 (77%), Gaps = 8/954 (1%) Strand=Plus/Plus Query 67353 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATT 67412 ||| || |||| | || | ||||||||||||||||||||||||||||| |||||||| Sbjct 77895 TCAACAACAGCTAAATCTAATGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 77954 Query 67413 CC-AAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTC 67471 || |||| || | ||| | |||||||||||||| || || ||| || || Sbjct 77955 CCTAAGT-TAGCACGGTTGATAATGTCTGCCCAAGTGTTGATTACACGACCTTGTGAATC 78013 Query 67472 AACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCAT 67531 || || |||||||||||||||||||| || | |||||||||||||||||| | ||| | Sbjct 78014 TACAACTGATTGGTTGAAGTTGAAACCATTTAAGTTGAATGCCATAGTTGAAATACCTAA 78073 Query 67532 TGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGA 67591 ||||||||||| || | || || || | ||||| | ||||||||| | | || Sbjct 78074 AGCAGTGAACCAAATACCAACAACTGGCCAAGCAGCTAAGAAGAAGTGTAATGAACGAGA 78133 Query 67592 GTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAAT 67651 ||||||||| || ||||| ||||| || || ||||||||||| |||||||| ||||| || Sbjct 78134 GTTGTTGAATGAAGCATATTGGAAAATTAAACGACCGAAGTAGCCATGAGCTGCAACGAT 78193 Query 67652 GTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGT 67711 ||||||||| ||||||||||| ||||| |||||||| | ||| ||| || | ||||| Sbjct 78194 GTTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCTTCGTTAGCTGATTCGTTTTCAGT 78253 Query 67712 AGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACC 67771 |||||| | || | ||||||||| ||||| ||||||||||| ||| || | |||||| Sbjct 78254 AGTTTCACGAATTAAAGAAGAAGTTACAAGTGAACCGTGCATTGCAGAGAATAATGAACC 78313 Query 67772 ACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGC 67831 ||| |||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| || Sbjct 78314 ACCAAATACACCAGCTACACCAAGCATGTGGAATGGGTGCATAAGAATGTTGTGCTCAGC 78373 Query 67832 TTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAA 67891 |||||| |||| |||| |||| |||||||| || ||||| | |||||| |||||||||| Sbjct 78374 TTGGAATACGATCATGAAGTTGAAAGTACCTGAGATACCTAAAGGCATACCGTCAGAGAA 78433 Query 67892 AGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGA 67951 |||||||||||||| || |||| | ||| ||||| ||||||| ||||| || || Sbjct 78434 AGAACCTTGACCGAGTGGGTAGATAATGAATACAGCTGTAGCTGCAGCAACTGGTGCTGA 78493 Query 67952 GTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACC 68011 ||| || || |||||| ||||||||||| | |||| |||| | |||||| | |||||| Sbjct 78494 GTAAGCAACTGCGATCCATGGACGCATACCTAAACGGAAAGATAATTCCCATTCACGACC 78553 Query 68012 ACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATT 68071 ||| | | || | | |||||| | || | ||||||| |||| ||||| || Sbjct 78554 CATGTAAGAACATACACCTAAGAAGAAGTGACAAACGATAAGTTGGTAAGGACCACCGTT 78613 Query 68072 ATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGC 68131 || ||||||||||||| || ||| |||||||| || || |||||||| | |||||| || Sbjct 78614 GTATAACCACTCATCTAAAGATGCAGCTTCCCAAATTGGGTAGAAGTGTAAACCGATAGC 78673 Query 68132 GTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGC 68191 ||| || |||||| || ||||||| ||||||||||| ||||| | | ||||| | Sbjct 78674 GTTAGATGTAGGAATAATTGCACCAGTGATGATGTTGTTTCCGTATAATAATGAACCAGA 78733 Query 68192 AACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAA 68251 ||||| || | |||||||||||||||||| ||||| || || || || || || ||||| Sbjct 78734 TACAGGCTCACGGATACCATCGATATCAACAGGAGGAGCCGCGATAAACGCGATAATGAA 78793 Query 68252 ---GCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACC 68302 ||||||| | | || || ||| ||||| || ||||| |||||||| Sbjct 78794 AACAGAAGTTGCAGTTAAAAG--AG-TAGGGATCATTAATACACCAAACCAACC 78844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566946066105600