Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq138 91.5 1e-13 seq112 91.5 1e-13 >seq138 Length=2592956 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | ||| |||||||||||||||||| || | | | | || | || Sbjct 406343 CAGCACCAGGTGCAGCGTGGACTCCTTCTGAATGTTATAATCGGCCAAGGTCCGGCCGTC 406284 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || |||||||| || || |||||||| |||| | ||||||||||| Sbjct 406283 CTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 406224 >seq112 Length=2452761 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | |||| ||||||||| ||||||||||| | || | || | || Sbjct 1009594 CAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCGTC 1009653 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || |||||||| || || |||||||| | || | ||||||||||| Sbjct 1009654 CTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 1009713 Score = 84.2 bits (92), Expect = 1e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | |||| ||||||||| ||||||||||| | ||| | || | || Sbjct 1012264 CAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGTACGGCCGTC 1012323 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||| ||||| || |||||||| || || |||||||| Sbjct 1012324 CTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTC 1012362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692164899040