Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq148 747 0.0 >seq148 Length=122497 Score = 747 bits (828), Expect = 0.0 Identities = 771/1006 (77%), Gaps = 2/1006 (0%) Strand=Plus/Minus Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110 || || |||||||||||| ||| | |||||||| || | |||||||| ||||| | Sbjct 78886 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 78827 Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGCTT-CATTGTTGCATTCGTAGCAGCACC 157169 ||||| || || | | | |||||| |||| || |||| | || || | || || || Sbjct 78826 ATGATCCCTACTCTTTTAACTGCAACT-TCTGTTTTCATTATCGCGTTTATCGCGGCTCC 78768 Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229 ||| ||||||||||| ||||| || || || || ||||||| | | || || ||||| Sbjct 78767 TCCTGTTGATATCGATGGTATCCGTGAGCCTGTATCTGGTTCATTATTATACGGAAACAA 78708 Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289 ||||||| |||||||| || ||||| | || ||||| |||||| | ||||||||||| || Sbjct 78707 CATCATCACTGGTGCAATTATTCCTACATCTAACGCTATCGGTTTACACTTCTACCCAAT 78648 Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349 |||||||| ||||| | ||||||||| | |||||||||||||||| |||||| | || Sbjct 78647 TTGGGAAGCTGCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAACTTATCGT 78588 Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 157409 | ||||||| | | || | | | | || ||||| ||||| |||||| | |||| ||| Sbjct 78587 TTGTCACTTCTTCTTAGGTGTATGTTCTTACATGGGTCGTGAATGGGAATTATCTTTCCG 78528 Query 157410 TTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGC 157469 |||||||||||| || |||||| ||||| ||||| |||||||| ||||| || | || Sbjct 78527 TTTAGGTATGCGTCCATGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 78468 Query 157470 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 157529 |||||| | |||| || ||||||||||||||||||| || | ||||||| | ||||| Sbjct 78467 TGTATTCATTATCTACCCACTCGGTCAAGGTTCTTTCTCTGACGGTATGCCTTTAGGTAT 78408 Query 157530 CTCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCC 157589 ||| |||||||| |||| ||| |||| ||||| || |||||||| ||||||||||| || Sbjct 78407 CTCAGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATTCTTATGCACCC 78348 Query 157590 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 157649 ||||||||||| || || ||||| ||||| ||||| || || |||||||| |||||||| Sbjct 78347 ATTCCACATGCTTGGTGTAGCTGGTGTATTTGGTGGTTCATTATTCTCTGCAATGCACGG 78288 Query 157650 AAGTCTCGTTACTTCCTCGCTTGTTCGTGAAACAACTGAAACAGAGTCACAGAACTATGG 157709 || || ||||| || | |||||||||| ||||||| || ||| ||| | || Sbjct 78287 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACTACTGAAAACGAATCAGCTAACGAAGG 78228 Query 157710 TTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGG 157769 |||||| ||||||||||||||||| || |||||||||||||| || || || |||||||| Sbjct 78227 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 78168 Query 157770 TCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGC 157829 ||| | || |||||||| ||||||||||||||| | | ||||||||| | || Sbjct 78167 TCGTTTAATTTTCCAATATGCTTCATTCAACAACTCTCGTTCATTACACTTCTTCTTAGC 78108 Query 157830 CGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAA 157889 || ||||| ||||| || || ||||||||||| | || | || ||||||||||| Sbjct 78107 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 78048 Query 157890 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 157949 | | || ||||||||||||||||| || | | ||| || |||||||| | ||||| Sbjct 78047 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 77988 Query 157950 CTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGC 158009 |||||||| | | ||||| ||| | ||||||||||| ||||| ||||||||||| Sbjct 77987 TTGGGCAGACATTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAGCGTAACGC 77928 Query 158010 ACACAACTTCCCACTGGATCTTGCTGCTGCAGAATCAACACCTGTT 158055 |||||||||||| | ||| | |||| || ||| | || ||||| Sbjct 77927 TCACAACTTCCCATTAGATTTAGCTGTTGTTGAAGCTCCAGCTGTT 77882 Score = 518 bits (574), Expect = 4e-142 Identities = 729/1018 (72%), Gaps = 4/1018 (0%) Strand=Plus/Plus Query 158769 GGATGGTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGG 158828 || |||||||| | | || ||||||||| || || ||||||||||| || || ||| Sbjct 31637 GGTTGGTTTGATGTTGTTGATGACTGGCTTCGTCGTGACCGTTTCGTTTTCGTAGGATGG 31696 Query 158829 TCTGGACTTCTTCTTCTACCC-ACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCAC 158887 || || || || || | ||| || || || ||||| | || |||||| | || || || Sbjct 31697 TCAGG-GTTATTATTATTCCCTACAGCATACCTTGCACTAGGTGGTTGGTTCACAGGAAC 31755 Query 158888 GACTTTCGCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGGTGCAAA 158947 || || | || |||||||| ||||| | || |||| ||| | || ||| || Sbjct 31756 TACATTTGTAACATCTTGGTATACTCATGGTTTAGCGTCTTCATATTTAGAAGGTTGCAA 31815 Query 158948 CTTTCTTACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCT 159007 ||| | ||||| || || || |||||||| || ||||||||| ||| | | | || Sbjct 31816 CTTCTTAACAGCTGCTGTATCAACTCCAGCGAATAGTATGGGTCACTCTTTATTATTCCT 31875 Query 159008 CTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAA 159067 ||||||||||| |||||||| ||||| | ||| ||| | || || || |||| Sbjct 31876 TTGGGGTCCTGAAGCTCAAGGTGATTTTACTCGTTGGTGTCAATTAGGTGGTCTTTGGAC 31935 Query 159068 TTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACT 159127 ||||| || || ||||| | ||| | || ||||||||||||||||| ||||||||| | Sbjct 31936 ATTTGTTGCCCTTCACGGGTCTTTTTCTCTTATTGGTTTCATGCTTCGTCAGTTTGAAAT 31995 Query 159128 GGCACGTCTCA-TCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTG 159186 |||||| ||| | || ||||| || || |||||||| ||||| | ||||||| ||| Sbjct 31996 TGCACGT-TCAGTAAAAATTCGTCCATATAACGCTATTGCTTTCTCAGCTCCTATTTCTG 32054 Query 159187 TTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGT 159246 | || || || ||| | || || || | || || || |||||||||| ||||| Sbjct 32055 TATTCGTTTCTGTTTTCTTAATTTATCCTTTAGGACAATCTGGTTGGTTTTTTGCTCCTA 32114 Query 159247 CCTTTGGGGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGA 159306 ||| || || || ||||| ||| | ||| | | ||| | ||||| |||||||| |||| Sbjct 32115 GCTTCGGTGTAGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGCTTCCACAACTGGA 32174 Query 159307 CACTAAACCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTG 159366 | ||||||| |||||||||||||| || || ||| | || |||| ||| | || | || Sbjct 32175 CTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGTGCTGCATTACTTTGTG 32234 Query 159367 CTATTCATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCT 159426 | ||||| || | || || ||||| ||| ||| || ||||| || |||||||| | Sbjct 32235 CGATTCACGGTGCAACTGTAGAAAACACACTATTTGAAGATGGTGATGGTGCAAACACAT 32294 Query 159427 TTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCT 159486 | |||||| | |||| || | || || || ||||| ||||| || ||||| || | Sbjct 32295 TCCGTGCGTTTAACCCAACACAGGCTGAAGAAACATATTCAATGGTTACGGCAAATCGTT 32354 Query 159487 TCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGT 159546 ||||||| || || || || | || ||||| ||||| || ||| | || |||||||||| Sbjct 32355 TCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTCTTTATGT 32414 Query 159547 TGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCA 159606 | ||||| || || | ||||| |||| ||||||| || | ||| | ||| | | Sbjct 32415 TATTTGTTCCAGTAACTGGTCTTTGGATGAGTGCTATTGGCGTTGTAGGTTTAGCTTTAA 32474 Query 159607 ATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTG 159666 || | ||||| || |||||||| ||||| || | || || |||||||| ||||||| Sbjct 32475 ATTTACGTGCATATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAATTTG 32534 Query 159667 AAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTG 159726 |||| ||||| || || || |||||| | || ||||| | ||||||||| |||| || Sbjct 32535 AAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTC 32594 Query 159727 CTGATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784 ||||| || |||||||| | | ||||| || || ||| ||||| | || ||||| Sbjct 32595 AAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGC 32652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545272509452800