Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq138 105 6e-18 seq112 98.7 1e-15 seq117 95.1 1e-14 >seq138 Length=2592956 Score = 105 bits (116), Expect = 6e-18 Identities = 88/106 (83%), Gaps = 4/106 (4%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || || |||||| ||| || || || ||||| |||||||||| Sbjct 406327 GTGGACTCCTTCTGAATGTTATAATCGGCCAAGGTCCGGCCG--TCCTCCAGCTGCTTGC 406270 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||||| | ||||| |||||||||||||| |||||||| |||||||| Sbjct 406269 CCGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 406224 >seq112 Length=2452761 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/107 (81%), Gaps = 4/107 (4%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || || || ||| | | ||| ||| |||||| ||||||||| Sbjct 1009609 GGTGGACTCCTTCTGGATGTTATAGTCGGCGAGCGT--ACGGCCGTCCTCCAGCTGCTTG 1009666 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 |||||| | ||||| |||||||||||||| || ||||| |||||||| Sbjct 1009667 CCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 1009713 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/99 (81%), Gaps = 4/99 (4%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || || || ||| | | || ||| |||||| ||||||||| Sbjct 1012279 GGTGGACTCCTTCTGGATGTTATAGTCGGCGAGGGT--ACGGCCGTCCTCCAGCTGCTTG 1012336 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCT 133559 |||||| | ||||| |||||||||||||| ||||||||| Sbjct 1012337 CCCGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCT 1012375 >seq117 Length=2441637 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAAATG 133532 ||||| || ||||| ||| ||| |||| |||||| |||||||||||||| | ||| Sbjct 1798842 TTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATG 1798901 Query 133533 AGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 || |||||||||||||| |||||||| |||||||| Sbjct 1798902 AGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 1798936 Score = 82.4 bits (90), Expect = 7e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 133483 TGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCT 133542 |||| ||| ||| |||| |||||| ||||||||||| || | ||||| ||||||| Sbjct 420299 TGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCT 420240 Query 133543 GGTCGGGAGGGATGCCTTCCTTGTC 133567 ||||||| |||||||| |||||||| Sbjct 420239 GGTCGGGCGGGATGCCCTCCTTGTC 420215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419833158400