Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq148 618 1e-172 >seq148 Length=122497 Score = 618 bits (684), Expect = 1e-172 Identities = 739/988 (75%), Gaps = 14/988 (1%) Strand=Plus/Minus Query 19496 TGGGAGCTTTTTACTAACTGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTT 19555 |||| | |||| | | ||||| ||| || | |||||| | || | || |||||| Sbjct 78895 TGGGCTCGTTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTT 78836 Query 19556 GGAACACTGATGATTCCGTGTCTCCTTGCAGCCACCATCTGCTT-CATTATTGCATTCAT 19614 || | | ||||| || ||| | | || || |||| || |||||| || || || Sbjct 78835 GGTGTATTAATGATCCCTACTCTTTTAACTGCAACT-TCTGTTTTCATTATCGCGTTTAT 78777 Query 19615 TGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTT-T 19673 |||||||| || ||||| || ||||| ||||| || || ||||| ||| | || || | Sbjct 78776 CGCGGCTCCTCCTGTTGATATCGATGGTATCCGTGAGCCTGTATCTGGTT-CATTATTAT 78718 Query 19674 ATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGC-AATGCCATCGGACTACAC 19732 | |||||||||||||| | || || | |||| | || | || || ||||| ||||| Sbjct 78717 ACGGAAACAACATCATCACTGGTGCAATTATTCCTA-CATCTAACGCTATCGGTTTACAC 78659 Query 19733 TTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTC 19792 ||||||||||||||||||||| || | ||||| ||| | |||||||| || || | | Sbjct 78658 TTCTACCCAATTTGGGAAGCTGCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTAC 78599 Query 19793 CAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAA 19852 |||||| | || | |||||| || | || | | | |||||||||| || || |||||| Sbjct 78598 CAACTTATCGTTTGTCACTTCTTCTTAGGTGTATGTTCTTACATGGGTCGTGAATGGGAA 78539 Query 19853 CTTAGCTATC-GACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGC 19911 ||| || || | |||| ||| | || ||||| ||||| ||||| || || ||||| Sbjct 78538 -TTATCTTTCCGTTTAGGTATGCGTCCATGGATCGCAGTTGCTTACTCAGCACCAGTTGC 78480 Query 19912 AGCCGCCTCTGCGGTCTTTCTCGTCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTAT 19971 || || | || || || | ||||||| | ||||| ||| ||||| || | ||| Sbjct 78479 TGCAGCTACAGCTGTATTCATTATCTACCCACTCGGTCAAGGTTCTTTCTCTGACGGTAT 78420 Query 19972 GCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACAT 20031 |||||| |||||||| ||||| ||||||| |||| | ||||||||||| || || ||||| Sbjct 78419 GCCTTTAGGTATCTCAGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACAT 78360 Query 20032 TCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAG 20091 ||| |||||||| ||||||||||||||||| ||||||||||| ||||| ||| ||||| Sbjct 78359 TCTTATGCACCCATTCCACATGCTTGGTGTAGCTGGTGTATTTGGTGGTTCATTATTCTC 78300 Query 20092 TGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAG 20151 ||| ||||||||||| ||||| || || || | | ||||| ||||||||| | ||| Sbjct 78299 TGCAATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAACTACTGAAAACGAA-- 78242 Query 20152 TCAG--AACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCT 20209 |||| ||| | |||||||| || || ||||||||||| || || |||||||| || ||| Sbjct 78241 TCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCT 78182 Query 20210 CATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTA 20269 ||||| ||||| || ||||| || |||||||| ||||| |||||||| ||||| || Sbjct 78181 CATGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCATTCAACAACTCTCGTTCATTA 78122 Query 20270 CACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCT 20329 ||||||||| | ||||| ||||| || || || ||||||||| |||| || || |||| Sbjct 78121 CACTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCA 78062 Query 20330 ACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGA-CAACAATGG 20388 || ||||| || || | || ||||||||||| ||||| || || | || |||| || Sbjct 78061 ACTATGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA-GG 78003 Query 20389 TCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGAT 20448 |||||| || | |||||||| |||||| |||| |||||||| | || | || || || Sbjct 78002 TCGTGTAATCAACACTTGGGCAGACATTATCAACCGTGCTAACTTAGGTATGGAAGTAAT 77943 Query 20449 GCATGAACGGAATGCTCATAACTTCCCA 20476 ||| || || || ||||| ||||||||| Sbjct 77942 GCACGAGCGTAACGCTCACAACTTCCCA 77915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148828517225280