Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq148 654 0.0 >seq148 Length=122497 Score = 654 bits (724), Expect = 0.0 Identities = 753/1002 (75%), Gaps = 11/1002 (1%) Strand=Plus/Minus Query 18712 CCTTGGGACTC-TTTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTG 18770 |||| || ||| ||||||||| |||||||| || || || |||||| | || ||||| || Sbjct 78899 CCTTTGGGCTCGTTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTG 78840 Query 18771 GTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCTACTATTTGTTTCATTATTGCCTT 18830 |||||| | | ||||| || ||| | | || ||| | ||||||||| || || Sbjct 78839 GTTTGGTGTATTAATGATCCCTACTCTTTTAACTGCAACTTCTGTTTTCATTATCGCGTT 78780 Query 18831 CATTGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCT 18890 || || || |||||||| || || ||||| ||||| |||||||| | || || | Sbjct 78779 TATCGCGGCTCCTCCTGTTGATATCGATGGTATCCGTGAGCCTGTATCTGGT--TCATTA 78722 Query 18891 TTAT--GGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGC-AATGCCATCGGACT 18947 |||| |||||||||||||| | || || | |||| | || | || || ||||| | Sbjct 78721 TTATACGGAAACAACATCATCACTGGTGCAATTATTCCTA-CATCTAACGCTATCGGTTT 78663 Query 18948 ACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACC 19007 ||||||||||||||||||||||||| || | ||||| ||| | |||||||| || || Sbjct 78662 ACACTTCTACCCAATTTGGGAAGCTGCATCTTTAGATGAGTGGTTATACAACGGTGGTCC 78603 Query 19008 GTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTG 19067 | ||||||| | || | |||||| || | || || | | |||||||||| || || || Sbjct 78602 TTACCAACTTATCGTTTGTCACTTCTTCTTAGGTGTATGTTCTTACATGGGTCGTGAATG 78543 Query 19068 GGAACTTAGCTATC-GACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTG 19126 |||| ||| || || | |||| ||||| || ||||| ||||| |||||||| || | Sbjct 78542 GGAA-TTATCTTTCCGTTTAGGTATGCGTCCATGGATCGCAGTTGCTTACTCAGCACCAG 78484 Query 19127 TTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACG 19186 |||| ||||| | || || ||| || |||| ||| | ||||||||||| || |||| Sbjct 78483 TTGCTGCAGCTACAGCTGTATTCATTATCTACCCACTCGGTCAAGGTTCTTTCTCTGACG 78424 Query 19187 CTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATA 19246 ||||||||| ||||| ||||| ||||||| |||| | |||||||| ||||| || | Sbjct 78423 GTATGCCTTTAGGTATCTCAGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACA 78364 Query 19247 ACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTAT 19306 |||| || |||||||| ||||||||||| ||||| |||||||| || || || ||| ||| Sbjct 78363 ACATTCTTATGCACCCATTCCACATGCTTGGTGTAGCTGGTGTATTTGGTGGTTCATTAT 78304 Query 19307 TTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAAACTACTGAAGAGG 19366 | ||| ||||||||||| ||||| || || || | | ||||||||||||||| | | Sbjct 78303 TCTCTGCAATGCACGGTTCACTTGTAACTTCTTCTTTAATTCGTGAAACTACTGAAAACG 78244 Query 19367 TATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTG 19426 ||| ||| | || ||||| || || ||||||||||| ||||| ||||| ||||| | Sbjct 78243 AATCAGCTAACGAAGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAG 78184 Query 19427 CTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTC 19486 ||||||| || || ||||| | |||||||| || || || |||||||| ||||| Sbjct 78183 CTCATGGCTACTTCGGTCGTTTAATTTTCCAATATGCTTCATTCAACAACTCTCGTTCAT 78124 Query 19487 TACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAA 19546 |||| ||||| || ||||||||||| || ||||| |||||||| | || | || | Sbjct 78123 TACACTTCTTCTTAGCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTT 78064 Query 19547 GCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACA-ACAAT 19605 || |||||||||||||| ||||| || ||||| ||||| || || | || |||| Sbjct 78063 CAACTATGGCATTCAACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA- 78005 Query 19606 GGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTA 19665 |||||||| || | |||||||| |||||| |||| ||||||||| | || | || ||| Sbjct 78004 GGTCGTGTAATCAACACTTGGGCAGACATTATCAACCGTGCTAACTTAGGTATGGAAGTA 77945 Query 19666 ATGCACGAACGTAATGCTCATAACTTCCCACTTGATTTGGCT 19707 |||||||| ||||| ||||| ||||||||| | ||||| ||| Sbjct 77944 ATGCACGAGCGTAACGCTCACAACTTCCCATTAGATTTAGCT 77903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141148531817280