Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq138 102 7e-17 seq117 87.8 2e-12 seq112 84.2 2e-11 >seq138 Length=2592956 Score = 102 bits (112), Expect = 7e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || ||||| || | ||| |||||| |||||||| |||||||||||||| || |||| Sbjct 406343 CAGCACCAGGTGCAGCGTGGACTCCTTCTGAATGTTATAATCGGCCAAGGTCCGGCCGTC 406284 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| ||||| || || | ||||||||||| | || | || ||||||||| Sbjct 406283 CTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 406224 Query 35644 C 35644 | Sbjct 406223 C 406223 >seq117 Length=2441637 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||||||| || || |||| ||||||||||| |||||||| | Sbjct 1798840 CCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCCGCAAAGA 1798899 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 | | ||||||||||| | || | || |||||||||| Sbjct 1798900 TGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 1798937 >seq112 Length=2452761 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 35559 TGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCT 35618 ||||||| |||| || || |||| ||||||||||| |||||||| |||| ||||||| Sbjct 1011619 TGTAATCAGCCAGCGTACGGCCGTCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGCT 1011678 Query 35619 GGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||| | |||| || |||||||||| Sbjct 1011679 GGTCGGGGGGAATGCCCTCCTTGTCC 1011704 Score = 82.4 bits (90), Expect = 7e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || ||||| | || || |||| ||||||||||| ||||| || Sbjct 1009615 CTCCTTCTGGATGTTATAGTCGGCGAGCGTACGGCCGTCCTCCAGCTGCTTGCCCGCGAA 1009674 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 || | ||||||||||| | |||| || |||||||||| Sbjct 1009675 GATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1009714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792698412800