Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq148 814 0.0 >seq148 Length=122497 Score = 814 bits (902), Expect = 0.0 Identities = 785/1005 (78%), Gaps = 2/1005 (0%) Strand=Plus/Minus Query 157676 TTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACTG 157735 || || ||||||||||| || | |||||||| || | |||||||| |||||| | Sbjct 78886 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTATTA 78827 Query 157736 ATGATTCCTACGTTGCTTGCTGCAACTATCTGTTT-CATCGTCGCCTTCGTCGCTGCTCC 157794 ||||| ||||| | | |||||||| ||||||| ||| |||| || |||| ||||| Sbjct 78826 ATGATCCCTACTCTTTTAACTGCAACT-TCTGTTTTCATTATCGCGTTTATCGCGGCTCC 78768 Query 157795 CCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAA 157854 ||||| || || || || ||||| || || || |||||||| | | || || ||||| Sbjct 78767 TCCTGTTGATATCGATGGTATCCGTGAGCCTGTATCTGGTTCATTATTATACGGAAACAA 78708 Query 157855 CATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCAT 157914 ||||||| |||||||| || |||||| || ||||| |||||| | ||||||||||| || Sbjct 78707 CATCATCACTGGTGCAATTATTCCTACATCTAACGCTATCGGTTTACACTTCTACCCAAT 78648 Query 157915 CTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGT 157974 |||||||| |||||| | || |||||| | || ||||||||||||| ||||||| | || Sbjct 78647 TTGGGAAGCTGCATCTTTAGATGAGTGGTTATACAACGGTGGTCCTTACCAACTTATCGT 78588 Query 157975 ATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCG 158034 | |||||| | | || | | | | || ||||| ||||| |||||| | |||| ||| Sbjct 78587 TTGTCACTTCTTCTTAGGTGTATGTTCTTACATGGGTCGTGAATGGGAATTATCTTTCCG 78528 Query 158035 TTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGC 158094 |||||||||||| ||||||||| || || || || || ||||| |||||||| | || Sbjct 78527 TTTAGGTATGCGTCCATGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 78468 Query 158095 AGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 158154 |||||| | |||| || ||||||||||||||||||| || | ||||||| | ||||| Sbjct 78467 TGTATTCATTATCTACCCACTCGGTCAAGGTTCTTTCTCTGACGGTATGCCTTTAGGTAT 78408 Query 158155 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 158214 ||| |||||||| |||| |||| | ||||||||||| || |||||||| ||||||||||| Sbjct 78407 CTCAGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATTCTTATGCACCC 78348 Query 158215 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 158274 ||||| ||||| ||||| ||||| ||||| ||||| || | |||||||| ||||| || Sbjct 78347 ATTCCACATGCTTGGTGTAGCTGGTGTATTTGGTGGTTCATTATTCTCTGCAATGCACGG 78288 Query 158275 AAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGG 158334 || || ||||| || | |||||||||| ||||||| || ||| ||| | || Sbjct 78287 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACTACTGAAAACGAATCAGCTAACGAAGG 78228 Query 158335 TTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGG 158394 ||| || ||||||||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct 78227 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 78168 Query 158395 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGC 158454 |||||| || |||||||| ||||||||||||||||| ||||| || ||||||||| | || Sbjct 78167 TCGTTTAATTTTCCAATATGCTTCATTCAACAACTCTCGTTCATTACACTTCTTCTTAGC 78108 Query 158455 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAA 158514 ||| ||||| ||||| || || |||||||| || | || | ||||| ||||||||||| Sbjct 78107 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 78048 Query 158515 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 158574 | | || ||||||||||||||||| || | | ||| || |||||||| | ||||| Sbjct 78047 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 77988 Query 158575 CTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGC 158634 |||||||| | | ||||| ||| | ||||||||||| ||||| ||||||||||| Sbjct 77987 TTGGGCAGACATTATCAACCGTGCTAACTTAGGTATGGAAGTAATGCACGAGCGTAACGC 77928 Query 158635 ACACAACTTCCCACTGGATCTTGCTGCTGCTGAGTCTACACCTGT 158679 |||||||||||| | ||| | |||| || ||| || || |||| Sbjct 77927 TCACAACTTCCCATTAGATTTAGCTGTTGTTGAAGCTCCAGCTGT 77883 Score = 571 bits (632), Expect = 7e-158 Identities = 740/1020 (73%), Gaps = 2/1020 (0%) Strand=Plus/Plus Query 159373 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGG 159432 || ||||||||||| | |||||||||||| || || || || || || || || ||| Sbjct 31637 GGTTGGTTTGATGTTGTTGATGACTGGCTTCGTCGTGACCGTTTCGTTTTCGTAGGATGG 31696 Query 159433 TCTGGACTCCTACTTCTTCCC-ACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCAC 159491 || || | || || ||||| || || || | || | || |||||| | || || || Sbjct 31697 TCAGGGTTATTA-TTATTCCCTACAGCATACCTTGCACTAGGTGGTTGGTTCACAGGAAC 31755 Query 159492 GACTTTTATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAA 159551 || ||| | || |||||| || || ||| | || ||| || | |||||| || Sbjct 31756 TACATTTGTAACATCTTGGTATACTCATGGTTTAGCGTCTTCATATTTAGAAGGTTGCAA 31815 Query 159552 TTTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 159611 || | || || ||||| ||||| || || || ||||||||| ||| | | | || Sbjct 31816 CTTCTTAACAGCTGCTGTATCAACTCCAGCGAATAGTATGGGTCACTCTTTATTATTCCT 31875 Query 159612 TTGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTC 159671 |||||||||||| ||||||| || || || ||||| ||| | || || ||||| | Sbjct 31876 TTGGGGTCCTGAAGCTCAAGGTGATTTTACTCGTTGGTGTCAATTAGGTGGTCTTTGGAC 31935 Query 159672 CTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAAT 159731 |||||||| || ||||| | || |||| || ||||| ||||| || || |||||||| Sbjct 31936 ATTTGTTGCCCTTCACGGGTCTTTTTCTCTTATTGGTTTCATGCTTCGTCAGTTTGAAAT 31995 Query 159732 TGCTCGTCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 159791 ||| ||| ||| || ||||| || || |||||||| ||||| | ||||||| |||| Sbjct 31996 TGCACGTTCAGTAAAAATTCGTCCATATAACGCTATTGCTTTCTCAGCTCCTATTTCTGT 32055 Query 159792 TTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAG 159851 || || || ||| | || ||||| | || || ||| ||||| ||||| ||||| Sbjct 32056 ATTCGTTTCTGTTTTCTTAATTTATCCTTTAGGACAATCTGGTTGGTTTTTTGCTCCTAG 32115 Query 159852 TTTCGGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGAC 159911 ||||| ||||| ||||| || ||||| | || ||| | || || |||||||||||||| Sbjct 32116 CTTCGGTGTAGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGCTTCCACAACTGGAC 32175 Query 159912 CCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGC 159971 | ||||| |||||||||||||| || || ||| |||| |||| ||| | | ||||| Sbjct 32176 TTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGTGCTGCATTACTTTGTGC 32235 Query 159972 AATCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATT 160031 || || ||||| |||||||| |||||| | ||||||||||| || ||||||||||| Sbjct 32236 GATTCACGGTGCAACTGTAGAAAACACACTATTTGAAGATGGTGATGGTGCAAACACATT 32295 Query 160032 TAAGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTT 160091 |||||| | || || || | ||||| || ||||| ||||| || ||||| || || Sbjct 32296 CCGTGCGTTTAACCCAACACAGGCTGAAGAAACATATTCAATGGTTACGGCAAATCGTTT 32355 Query 160092 CTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTT 160151 |||||| || || || ||||| || ||||| ||||| || ||| | || || || ||||| Sbjct 32356 CTGGTCACAAATTTTTGGTGTAGCTTTTTCAAACAAACGTTGGTTACACTTCTTTATGTT 32415 Query 160152 GTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAA 160211 ||||| || || | ||||| |||| |||||||| || | ||| | ||||| || Sbjct 32416 ATTTGTTCCAGTAACTGGTCTTTGGATGAGTGCTATTGGCGTTGTAGGTTTAGCTTTAAA 32475 Query 160212 CCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGA 160271 | ||||| || |||||||| || || ||| | || || ||||||||||||||||| Sbjct 32476 TTTACGTGCATATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAAGATCCTGAATTTGA 32535 Query 160272 GACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGC 160331 || ||||| || || || || || || || ||||| |||||||||||||||| || Sbjct 32536 AACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCTGCTCA 32595 Query 160332 TGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391 ||||| || |||||||| || | ||||||||||| || |||| | || ||||| || Sbjct 32596 AGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCACGTGGAAACGCTCT 32655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573022853952000