Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq32 93.3 5e-14 seq103 86.0 7e-12 >seq32 Length=3221238 Score = 93.3 bits (102), Expect = 5e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| | || || | || ||||| |||||||| || ||||||||||| ||||| ||| Sbjct 1864694 TTTGCTGAGCGGCTGGTGGCCTTTGCGTGCGTGGAGGGCATCTTCTTCTCCGGCTCCTTC 1864635 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGG 60073 || | || ||||||||||| ||||| ||||||||||| || Sbjct 1864634 TGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1864594 >seq103 Length=954929 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 79469 AGTCCATGATGTCGGCGTGCCACGGCTC-CAGATAGATGGCGAACGAACCCTTGCGCTTG 79527 |||| | ||||||||||||||| ||||| ||| || ||||| || | |||||||||||| Sbjct 464803 AGTCGAAGATGTCGGCGTGCCAGGGCTCGCAG-TACATGGCAAATGCGCCCTTGCGCTTG 464861 Query 79528 CCGCCGCCCTGGTTGACGTACCGGGC 79553 ||||||||||||| ||||| || || Sbjct 464862 CCGCCGCCCTGGTCCACGTAGCGAGC 464887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523702950400