Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlorella_20sorokiniana_20[genbank_20GCA_5F002245835.1_202017-08-10] 160 sequences; 59,568,085 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq25 107 2e-18 >seq25 Length=3522502 Score = 107 bits (118), Expect = 2e-18 Identities = 100/127 (79%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 117467 TGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTG 117526 ||||||||||||||||||| |||||| |||||||| ||||| | ||||||| |||| Sbjct 1244856 TGCTCCGCCACGTAGCCCGACAGCTGCGCCACCTTGATGTCGCTCTTCAGGTTGCGCTTG 1244797 Query 117527 AGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATC 117586 | ||||||| | || | ||||||||| | |||||||| || ||| ||| | ||||| Sbjct 1244796 AAGCAGGCAAACATGATCTTGCGCTGGCCCGGCTTCAGCCCGTCCACCATGCAGGGGATG 1244737 Query 117587 GAACGCT 117593 || |||| Sbjct 1244736 GAGCGCT 1244730 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 152191 TGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTG 152250 |||||||| | ||| |||| || |||||||||||| ||||| || ||||||| |||| Sbjct 1244856 TGCTCCGCCACGTAGCCCGACAGCTGCGCCACCTTGATGTCGCTCTTCAGGTTGCGCTTG 1244797 Query 152251 AGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATC 152310 | ||||| | || | |||||||||| || |||| |||||||||| | || || Sbjct 1244796 AAGCAGGCAAACATGATCTTGCGCTGGCCCGGCTTCAGCCCGTCCACCATGCAGGGGATG 1244737 Query 152311 GAACGCT 152317 || |||| Sbjct 1244736 GAGCGCT 1244730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214905568000